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Selectivity in the Addition of Electron Deficient Radicals to the C2 Position of Indoles.

ABSTRACT: The addition of electron deficient radicals to the C2 position of indoles has been described in the literature as opposed to electrophilic addition at the C3 position. Density functional theory calculations were used to understand the switch in regioselectivity from C3 to C2 for indole to undergo radical additions. Electron deficient radicals have a lower barrier for reaction at C2 and a lower energy radical intermediate that benefits from benzylic radical stabilization. Trifluoromethyl radical addition has a lower energy barrier than acetonitrile radical, and the C3 addition transition state is just 0.8 kcal/mol higher than C2. This is supported by experimental observations.

SUBMITTER: Li Y

PROVIDER: S-EPMC7939109 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:The azide radical (N3?) is one of the most important one-electron oxidants used extensively in radiation chemistry studies involving molecules of biological significance. Generally, it was assumed that N3? reacts in aqueous solutions only by electron transfer. However, there were several reports indicating the possibility of N3? addition in aqueous solutions to organic compounds containing double bonds. The main purpose of this study was to find an experimental approach that allows a clear assignment of the nature of obtained products either to its one-electron oxidation or its addition products. Radiolysis of water provides a convenient source of one-electron oxidizing radicals characterized by a very broad range of reduction potentials. Two inorganic radicals (SO4?-, CO3?-) and Tl2+ ions with the reduction potentials higher, and one radical (SCN)2?- with the reduction potential slightly lower than the reduction potential of N3? were selected as dominant electron-acceptors. Transient absorption spectra formed in their reactions with a series of quinoxalin-2-one derivatives were confronted with absorption spectra formed from reactions of N3? with the same series of compounds. Cases, in which the absorption spectra formed in reactions involving N3? differ from the absorption spectra formed in the reactions involving other one-electron oxidants, strongly indicate that N3? is involved in the other reaction channel such as addition to double bonds. Moreover, it was shown that high-rate constants of reactions of N3? with quinoxalin-2-ones do not ultimately prove that they are electron transfer reactions. The optimized structures of the radical cations (7-R-3-MeQ)?+, radicals (7-R-3-MeQ)? and N3? adducts at the C2 carbon atom in pyrazine moiety and their absorption spectra are reasonably well reproduced by density functional theory quantum mechanics calculations employing the ?B97XD functional combined with the Dunning's aug-cc-pVTZ correlation-consistent polarized basis sets augmented with diffuse functions.

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Selectivity in the Addition of Electron Deficient Radicals to the C2 Position of Indoles.

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