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Extrusion of subducted crust explains the emplacement of far-travelled ophiolites.

ABSTRACT: Continental subduction below oceanic plates and associated emplacement of ophiolite sheets remain enigmatic chapters in global plate tectonics. Numerous ophiolite belts on Earth exhibit a far-travelled ophiolite sheet that is separated from its oceanic root by tectonic windows exposing continental crust, which experienced subduction-related high pressure-low temperature metamorphism during obduction. However, the link between continental subduction-exhumation dynamics and far-travelled ophiolite emplacement remains poorly understood. Here we combine data collected from ophiolite belts worldwide with thermo-mechanical simulations of continental subduction dynamics to show the causal link between the extrusion of subducted continental crust and the emplacement of far-travelled ophiolites. Our results reveal that buoyancy-driven extrusion of subducted crust triggers necking and breaking of the overriding oceanic upper plate. The broken-off piece of oceanic lithosphere is then transported on top of the continent along a flat thrust segment and becomes a far-travelled ophiolite sheet separated from its root by the extruded continental crust. Our results indicate that the extrusion of the subducted continental crust and the emplacement of far-travelled ophiolite sheets are inseparable processes.

SUBMITTER: Porkolab K

PROVIDER: S-EPMC7940418 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:We recently used in situ Hi-C to create kilobase-resolution 3D maps of mammalian genomes. Here, we combine these with new Hi-C, microscopy, and genome-editing experiments to study the physical structure of chromatin fibers, domains, and loops. We find that the observed contact domains are inconsistent with the equilibrium state for an ordinary condensed polymer. Combining Hi-C data and novel mathematical theorems, we show that contact domains are also not consistent with a fractal globule. Instead, we use physical simulations to study two models of genome folding. In one, intermonomer attraction during polymer condensation leads to formation of an anisotropic "tension globule." In the other, CTCF and cohesin act together to extrude loops during interphase. Both models are consistent with the observed contact domains and with the observation that contact domains tend to form inside loops. However, the extrusion model explains a far wider array of observations, such as why loops tend not to overlap and why the CTCF-binding motifs at pairs of loop anchors lie in the convergent orientation. Finally, we perform 13 genome-editing experiments examining the effect of altering CTCF-binding sites on chromatin folding. The convergent rule correctly predicts the affected loop in every case. Moreover, the extrusion model accurately predicts in silico the 3D maps resulting from each experiment using only the location of CTCF-binding sites in the WT. Thus, we show that it is possible to disrupt, restore, and move loops and domains using targeted mutations as small as a single base pair. in situ Hi-C and HYbrid Capture Hi-C (Hi-C2) were used to probe the three-dimensional structure of the genome in two different human cell types before and after genome editing.

2015-10-23 | E-GEOD-74072 | biostudies-arrayexpress

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.

Project description:We recently used in situ Hi-C to create kilobase-resolution 3D maps of mammalian genomes. Here, we combine these maps with new Hi-C, microscopy, and genome-editing experiments to study the physical structure of chromatin fibers, domains, and loops. We find that the observed contact domains are inconsistent with the equilibrium state for an ordinary condensed polymer. Combining Hi-C data and novel mathematical theorems, we show that contact domains are also not consistent with a fractal globule. Instead, we use physical simulations to study two models of genome folding. In one, intermonomer attraction during polymer condensation leads to formation of an anisotropic "tension globule." In the other, CCCTC-binding factor (CTCF) and cohesin act together to extrude unknotted loops during interphase. Both models are consistent with the observed contact domains and with the observation that contact domains tend to form inside loops. However, the extrusion model explains a far wider array of observations, such as why loops tend not to overlap and why the CTCF-binding motifs at pairs of loop anchors lie in the convergent orientation. Finally, we perform 13 genome-editing experiments examining the effect of altering CTCF-binding sites on chromatin folding. The convergent rule correctly predicts the affected loops in every case. Moreover, the extrusion model accurately predicts in silico the 3D maps resulting from each experiment using only the location of CTCF-binding sites in the WT. Thus, we show that it is possible to disrupt, restore, and move loops and domains using targeted mutations as small as a single base pair.

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