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The complete chloroplast genome sequence of Oryza sativa Temperate japonica.

ABSTRACT: In this study, the complete chloroplast genome of O. sativa Temperate Japonica YunJing-24 was assembled using Illumina sequencing data. The complete chloroplast (cp) genome is 134,556 bp in length, including a pair of invert repeats (IRA and IRB) regions of 20,797 bp, large single-copy (LSC) region of 80,615 bp, and small single-copy (SSC) region of 12,347 bp. A total of 129 genes were predicted in the genome, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis confirmed the phylogenetic relationship between O. sativa Temperate Japonica and other representative species.

SUBMITTER: Feng Q

PROVIDER: S-EPMC7971287 | biostudies-literature | 2021 Mar

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequence of Oryza sativa Temperate japonica.

Feng Qi Q Song Wei-Cai WC Zhang Yun-Jiao YJ Shi Chao C

Mitochondrial DNA. Part B, Resources 20210316 3

In this study, the complete chloroplast genome of O. sativa Temperate Japonica YunJing-24 was assembled using Illumina sequencing data. The complete chloroplast (cp) genome is 134,556 bp in length, including a pair of invert repeats (IRA and IRB) regions of 20,797 bp, large single-copy (LSC) region of 80,615 bp, and small single-copy (SSC) region of 12,347 bp. A total of 129 genes were predicted in the genome, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogeneti ...[more]

PMID: 33796685

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