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Complete mitochondrial genome of nearly threatened freshwater ornamental fish, Microphis deocata and its phylogenetic relationship within Syngnathidae.

ABSTRACT: Microphis deocata (deocata pipefish), belonging to family Syngnathidae, is one of the important indigenous ornamental fish species listed as near threatened in the IUCN red list. Here, we first report the complete mitochondrial genome of deocata pipefish using Illumina next-generation sequencing platform. The total length of the mitogenome is 16,526 bp. It encompasses 13 protein coding genes, 2 ribosomal rRNAs, and 22 tRNAs. The WANCY region (a cluster of five tRNA genes) contains the 50 bp O_L light strand origin of replication. Phylogenetic analysis of Syngnathidae revealed M. deocata to cluster with Oostethus manadensis, forming a sister group with Doryrhamphus japonicas and Dunckerocampus dactyliophorus. The mitochondrial genome sequence data generated in the present study will play an important role in population genetic analysis and developing conservation strategies for this species.

SUBMITTER: Sahoo L

PROVIDER: S-EPMC8008872 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:BackgroundThe use of ornamental fish as pets has important implications for the conservation of the species used in fish keeping, particularly in relation to overexploitation. Understanding ornamental fish keepers' relationship with the hobby can provide important information for assessing the potential impacts of the activity. Here, we analyzed the profile of Brazilian ornamental fish keepers and evaluated their preferences and the implications of their choices.MethodsInformation was obtained by applying questionnaires to 906 ornamental fish keepers participating in fish keeping groups in a social network. The questionnaire contained questions about the species of fish kept (freshwater and marine), techniques used, socio-economic aspects, and associated conservation perspectives.ResultsMost ornamental fish keepers were young men (20-40 years old), with higher education and monthly income above US$ 530.00. Participants predominantly kept freshwater fish (86%), but marine fish only (5%) or both marine and freshwater hobbyists (9%) were also recorded. A total of 523 species of ornamental fish were kept, most of which comprised freshwater (76% of the total) and exotic species (73%). About a third of the fish species recorded were under national trade restrictions. In addition, about a third of ornamental fish keepers declared that they also had invertebrates. Marine aquariums require a greater financial investment, especially at the beginning, than freshwater aquariums and are also almost entirely based on exotic species. The aesthetic factor is the main motivation associated with practicing this hobby, being color and behavior key factors in choosing fish. A total of 10% of hobbyists have already released fish into the wild, highlighting concerns about potential biological invasions. There is an urgent need to enforce regulations towards restricting ornamental fish keepers' access to threatened native species and potentially invasive species, as well as measures aimed at informing and raising hobbyists' awareness of conservation measures related to the hobby.

Dataset Information

Complete mitochondrial genome of nearly threatened freshwater ornamental fish, Microphis deocata and its phylogenetic relationship within Syngnathidae.

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