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Pathophysiology of SARS-CoV-2: the Mount Sinai COVID-19 autopsy experience.

ABSTRACT: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its associated clinical syndrome COVID-19 are causing overwhelming morbidity and mortality around the globe and disproportionately affected New York City between March and May 2020. Here, we report on the first 100 COVID-19-positive autopsies performed at the Mount Sinai Hospital in New York City. Autopsies revealed large pulmonary emboli in six cases. Diffuse alveolar damage was present in over 90% of cases. We also report microthrombi in multiple organ systems including the brain, as well as hemophagocytosis. We additionally provide electron microscopic evidence of the presence of the virus in our samples. Laboratory results of our COVID-19 cohort disclose elevated inflammatory markers, abnormal coagulation values, and elevated cytokines IL-6, IL-8, and TNFα. Our autopsy series of COVID-19-positive patients reveals that this disease, often conceptualized as a primarily respiratory viral illness, has widespread effects in the body including hypercoagulability, a hyperinflammatory state, and endothelial dysfunction. Targeting of these multisystemic pathways could lead to new treatment avenues as well as combination therapies against SARS-CoV-2 infection.

SUBMITTER: Bryce C

PROVIDER: S-EPMC8015313 | biostudies-literature | 2021 Aug

REPOSITORIES: biostudies-literature

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Pathophysiology of SARS-CoV-2: the Mount Sinai COVID-19 autopsy experience.

Bryce Clare C Grimes Zachary Z Pujadas Elisabet E Ahuja Sadhna S Beasley Mary Beth MB Albrecht Randy R Hernandez Tahyna T Stock Aryeh A Zhao Zhen Z AlRasheed Mohamed Rizwan MR Chen Joyce J Li Li L Wang Diane D Corben Adriana A Haines G Kenneth GK Westra William H WH Umphlett Melissa M Gordon Ronald E RE Reidy Jason J Petersen Bruce B Salem Fadi F Fiel Maria Isabel MI El Jamal Siraj M SM Tsankova Nadejda M NM Houldsworth Jane J Mussa Zarmeen Z Veremis Brandon B Sordillo Emilia E Gitman Melissa R MR Nowak Michael M Brody Rachel R Harpaz Noam N Merad Miriam M Gnjatic Sacha S Liu Wen-Chun WC Schotsaert Michael M Miorin Lisa L Aydillo Gomez Teresa A TA Ramos-Lopez Irene I Garcia-Sastre Adolfo A Donnelly Ryan R Seigler Patricia P Keys Calvin C Cameron Jennifer J Moultrie Isaiah I Washington Kae-Lynn KL Treatman Jacquelyn J Sebra Robert R Jhang Jeffrey J Firpo Adolfo A Lednicky John J Paniz-Mondolfi Alberto A Cordon-Cardo Carlos C Fowkes Mary E ME

Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 20210401 8

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its associated clinical syndrome COVID-19 are causing overwhelming morbidity and mortality around the globe and disproportionately affected New York City between March and May 2020. Here, we report on the first 100 COVID-19-positive autopsies performed at the Mount Sinai Hospital in New York City. Autopsies revealed large pulmonary emboli in six cases. Diffuse alveolar damage was present in over 90% of cases. We also report microth ...[more]

PMID: 33795830

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Project description:OBJECTIVE:To assess association of clinical features on COVID-19 patient outcomes. DESIGN:Retrospective observational study using electronic medical record data. SETTING:Five member hospitals from the Mount Sinai Health System in New York City (NYC). PARTICIPANTS:28?336 patients tested for SARS-CoV-2 from 24 February 2020 to 15 April 2020, including 6158 laboratory-confirmed COVID-19 cases. MAIN OUTCOMES AND MEASURES:Positive test rates and in-hospital mortality were assessed for different racial groups. Among positive cases admitted to the hospital (N=3273), we estimated HR for both discharge and death across various explanatory variables, including patient demographics, hospital site and unit, smoking status, vital signs, lab results and comorbidities. RESULTS:Hispanics (29%) and African Americans (25%) had disproportionately high positive case rates relative to their representation in the overall NYC population (p<0.05); however, no differences in mortality rates were observed in hospitalised patients based on race. Outcomes differed significantly between hospitals (Gray's T=248.9; p<0.05), reflecting differences in average baseline age and underlying comorbidities. Significant risk factors for mortality included age (HR 1.05, 95% CI 1.04 to 1.06; p=1.15e-32), oxygen saturation (HR 0.985, 95% CI 0.982 to 0.988; p=1.57e-17), care in intensive care unit areas (HR 1.58, 95% CI 1.29 to 1.92; p=7.81e-6) and elevated creatinine (HR 1.75, 95% CI 1.47 to 2.10; p=7.48e-10), white cell count (HR 1.02, 95% CI 1.01 to 1.04; p=8.4e-3) and body mass index (BMI) (HR 1.02, 95% CI 1.00 to 1.03; p=1.09e-2). Deceased patients were more likely to have elevated markers of inflammation. CONCLUSIONS:While race was associated with higher risk of infection, we did not find racial disparities in inpatient mortality suggesting that outcomes in a single tertiary care health system are comparable across races. In addition, we identified key clinical features associated with reduced mortality and discharge. These findings could help to identify which COVID-19 patients are at greatest risk of a severe infection response and predict survival.

Project description:BackgroundSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is commonly associated with myocardial injury and heart failure. The pathophysiology behind this phenomenon remains unclear, with many diverse and multifaceted hypotheses. To contribute to this understanding, we describe the underlying cardiac findings in fifty patients who died with coronavirus disease 2019 (COVID-19).MethodsIncluded were autopsies performed on patients with a positive SARS-CoV-2 reverse-transcriptase-polymerase-chain reaction test from the index hospitalization. In the case of out-of-hospital death, patients were included if post-mortem testing was positive. Complete autopsies were performed according to a COVID-19 safety protocol, and all patients underwent both macroscopic and microscopic examination. If available, laboratory findings and echocardiograms were reported.ResultsThe median age of the decedents was 63.5 years. The most common comorbidities included hypertension (90.0%), diabetes (56.0%) and obesity (50.0%). Lymphocytic inflammatory infiltrates in the heart were present in eight (16.0%) patients, with focal myocarditis present in two (4.0%) patients. Acute myocardial ischemia was observed in eight (16.0%) patients. The most common findings were myocardial fibrosis (80.0%), hypertrophy (72.0%), and microthrombi (66.0%). The most common causes of death were COVID-19 pneumonia in 18 (36.0%), COVID-19 pneumonia with bacterial superinfection in 12 (24.0%), and COVID-19 pneumonia with pulmonary embolism in 10 (20.0%) patients.ConclusionsCardiovascular comorbidities were prevalent, and pathologic changes associated with hypertensive and atherosclerotic cardiovascular disease were the most common findings. Despite markedly elevated inflammatory markers and cardiac enzymes, few patients exhibited inflammatory infiltrates or necrosis within cardiac myocytes. A unifying pathophysiologic mechanism behind myocardial injury in COVID-19 remains elusive, and additional autopsy studies are needed.

Dataset Information

Pathophysiology of SARS-CoV-2: the Mount Sinai COVID-19 autopsy experience.

Publications

Pathophysiology of SARS-CoV-2: the Mount Sinai COVID-19 autopsy experience.

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