Resorcin[4]arene-based multidentate phosphate ligands with superior binding affinity for nanocrystal surfaces.
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ABSTRACT:
SUBMITTER: Nemat SJ
PROVIDER: S-EPMC8112235 | biostudies-literature |
REPOSITORIES: biostudies-literature
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Project description:Controlling the self-assembly of molecules in water is difficult because the small size, polarity, and hydrogen bond donating and accepting properties of water attenuate most non-covalent interactions. Here we describe how resorcinarene 1, with pyridinium pendent groups, assembles in water to form head-to-tail assemblies. These small supramolecular polymers form because they offer greater stabilization than any latent head-to-head assembly of resorcinarenes to form dimeric (or hexameric) containers. Instead, the resorcinarene bowl - particularly if negatively charged - is a good host for the pyridinium pendent groups of a second resorcinarene. Alternatively, resorcinarene 1 is also a good host for complexing anions and cations of any added salt. In combination therefore, host 1 possesses a rich repertoire of supramolecular properties that is dependent on the ionic strength and the nature of salts, pH, and the concentration of the host. These findings provide new information about controlling the self-assembly of resorcinarenes in water.
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Project description:The copper coordination chemistry of two multidentate carboxamido ligands derived from HL1 (offering two quinolyl and one carboxamide donor) and H4L2 (with two pyridine(dicarboxamido) units linked by naphthalene spacers) was explored. The former was chosen because upon deprotonation it would provide a monoanionic mer-coordinating N-donor set that would model the putative deprotonated form of the His-brace in copper monooxygenases, while the latter was designed to bind two copper ions and enable comparisons to other systems with different ligand spacers. Upon reaction with Cu(I)-mesityl, HL1 yielded a symmetric dimer (L1Cu)2 in which each bis(quinolyl)amide ligand binds via two N-donors to one Cu(I) ion and via the third to the other Cu(I) center. Monomeric Cu(II) complexes [L 1 Cu(H 2 O) 2 ](OTf) and L 1 2 Cu were also characterized. Treatment of H4L2 with Cu(OTf)2 and excess Me4NOH (in CH3CN, pyridine/H2O, or MeOH) yielded complexes with anions of general formula [L 2 Cu 2 (X)]n-, where X = CH3CONH- (n = 1), CO3 2- (n = 2), or MeO- (n = 1). X-ray structures of these complexes revealed the (L2)4- ligand binding to two Cu(II) ions in an open paddle-wheel geometry, with an additional bridging ligand (X) completing the square planar coordination sphere of each metal ion. The open paddlewheel motif differs from the more 'open' puckered geometry seen with related ligands with different spacer units.
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Project description:By utilizing a novel octacarboxylate-functionalized resorcin[4]arene as organic linkers, three lanthanide-coordination polymers, namely, [(CH3)2NH2][Ln2(HL)(H2O)7]·2H2O (Ln = Tb (1), Eu (2) and Gd (3), H8L = 2,8,14,20-tetra-pentyl-4,6,10,12,16,18,22,24-octa-carboxymethoxy-resorcin[4]arene) have been solvothermally synthesized and structurally characterized. Isostructural 1-3 display unique two dimensional sandwich-based layers built with Ln3+ cations and bowl-shaped HL7- anions. Remarkably, 1 and 2 produce intensive green and red emissions respectively and long lifetimes thanks to the antenna effect of HL7- anions. The energy level testing of 3 indicates that the newly designed ligand H8L has a very efficient intersystem crossing process. More importantly, luminescent investigations reveal that 1 and 2 can selectively detect N,N'-dimethylformamide and Fe3+ ions with turn-on-type and turn-off-type responses, respectively.
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Project description:In this study, the synthesis and structure of 4-aminocoumarin derivatives of resorcin[4]arene were investigated. Spectroscopic analysis and quantum mechanical calculations showed that this molecule undertakes a crown-in conformation in chloroform. The conformations of the aminocoumarin derivative of resorcin[4]arene were compared with a hydroxycoumarin derivative of resorcin[4]arene, and the effect of the substituent on the conformational selectivity of the coumarin derivatives of resorcin[4]arene was demonstrated. Both UV-VIS and fluorescence spectroscopy for the coumarin derivative of resorcin[4]arene (3) were performed, and a strong fluorescence quenching of derivative 3 compared to 4-aminocoumarin was observed.
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Project description:Water-soluble tetrasulfonate resorcin[4]arene (1a and 1c) and pyrogallol[4]arene (1b) macrocycles were synthesized and investigated for their dispersing properties in cement-based mortars. Mortar tests clearly show that these polyhydroxylated macrocycles (nonpolymeric) work as cement dispersants. Setting time determinations indicate that the macrocycles 1a and 1b show a retarding effect that is reminiscent of the behavior of superplasticizers (SPs) functionalized with polyhydroxylated β-CDs. Finally, the addition of sulfate anions to the cement paste does not affect the dispersing abilities of 1b, probably due to the sulfate anion capture by H-bonding interactions with its OH groups at the upper rim.
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Project description:Potent and specific inhibitors of protein.protein interactions have potential both as therapeutic compounds and biological tools, yet discovery of such molecules remains a challenge. Our laboratory has recently described a strategy, called protein grafting, for the identification of miniature proteins that bind protein surfaces with high affinity and specificity and inhibit the formation of protein.protein complexes. In protein grafting, those residues that comprise a functional alpha-helical binding epitope are stabilized on the solvent-exposed alpha-helical face of the small yet stable protein avian pancreatic polypeptide (aPP). Here we use protein grafting in combination with molecular evolution by phage display to identify phosphorylated peptide ligands that recognize the shallow surface of CBP KIX with high nanomolar to low micromolar affinity. Furthermore, we show that grafting of the CBP KIX-binding epitope of CREB KID onto the aPP scaffold yields molecules capable of high affinity recognition of CBP KIX even in the absence of phosphorylation. Importantly, both classes of designed ligands exhibit high specificity for the target CBP KIX domain over carbonic anhydrase and calmodulin, two unrelated proteins that bind hydrophobic or alpha-helical molecules that might be encountered in vivo.
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Project description:The title compound, C(68)H(64)O(8)·C(4)H(8)O(2), is a new resorcin-[4]arene cavitand synthetic precursor, obtained by alkyl-ation of a previously reported resorcin[4]arene. The additional alkyl bridges significantly rigidify the structure and enforce a 'bowl' shape on the mol-ecular cavity. In the crystal structure, the mol-ecule lies on a crystallographic mirror plane, and a single ethyl acetate mol-ecule (also lying on the mirror plane) is present within the compound cavity, illustrating the host capabilities of the mol-ecule.
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