Dataset Information

Non-Contact Respiration Measurement Method Based on RGB Camera Using 1D Convolutional Neural Networks.

ABSTRACT: Conventional respiration measurement requires a separate device and/or can cause discomfort, so it is difficult to perform routinely, even for patients with respiratory diseases. The development of contactless respiration measurement technology would reduce discomfort and help detect and prevent fatal diseases. Therefore, we propose a respiration measurement method using a learning-based region-of-interest detector and a clustering-based respiration pixel estimation technique. The proposed method consists of a model for classifying whether a pixel conveys respiration information based on its variance and a method for classifying pixels with clear breathing components using the symmetry of the respiration signals. The proposed method was evaluated with the data of 14 men and women acquired in an actual environment, and it was confirmed that the average error was within approximately 0.1 bpm. In addition, a Bland-Altman analysis confirmed that the measurement result had no error bias, and regression analysis confirmed that the correlation of the results with the reference is high. The proposed method, designed to be inexpensive, fast, and robust to noise, is potentially suitable for practical use in clinical scenarios.

SUBMITTER: Hwang HS

PROVIDER: S-EPMC8157066 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Similar Datasets

Project description:Motivation:In addition to substitution frequency data from protein sequence alignments, many state-of-the-art methods for contact prediction rely on additional sources of information, or features, of protein sequences in order to predict residue-residue contacts, such as solvent accessibility, predicted secondary structure, and scores from other contact prediction methods. It is unclear how much of this information is needed to achieve state-of-the-art results. Here, we show that using deep neural network models, simple alignment statistics contain sufficient information to achieve state-of-the-art precision. Our prediction method, DeepCov, uses fully convolutional neural networks operating on amino-acid pair frequency or covariance data derived directly from sequence alignments, without using global statistical methods such as sparse inverse covariance or pseudolikelihood estimation. Results:Comparisons against CCMpred and MetaPSICOV2 show that using pairwise covariance data calculated from raw alignments as input allows us to match or exceed the performance of both of these methods. Almost all of the achieved precision is obtained when considering relatively local windows (around 15 residues) around any member of a given residue pairing; larger window sizes have comparable performance. Assessment on a set of shallow sequence alignments (fewer than 160 effective sequences) indicates that the new method is substantially more precise than CCMpred and MetaPSICOV2 in this regime, suggesting that improved precision is attainable on smaller sequence families. Overall, the performance of DeepCov is competitive with the state of the art, and our results demonstrate that global models, which employ features from all parts of the input alignment when predicting individual contacts, are not strictly needed in order to attain precise contact predictions. Availability and implementation:DeepCov is freely available at https://github.com/psipred/DeepCov. Supplementary information:Supplementary data are available at Bioinformatics online.

Dataset Information

Non-Contact Respiration Measurement Method Based on RGB Camera Using 1D Convolutional Neural Networks.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets