Ontology highlight
ABSTRACT:
SUBMITTER: Sahin M
PROVIDER: S-EPMC8184932 | biostudies-literature | 2021 Jun
REPOSITORIES: biostudies-literature
Sahin Merve M Wong Wilfred W Zhan Yingqian Y Van Deynze Kinsey K Koche Richard R Leslie Christina S CS
Nature communications 20210607 1
Recent genome-wide chromosome conformation capture assays such as Hi-C and HiChIP have vastly expanded the resolution and throughput with which we can study 3D genomic architecture and function. Here, we present HiC-DC+, a software tool for Hi-C/HiChIP interaction calling and differential analysis using an efficient implementation of the HiC-DC statistical framework. HiC-DC+ integrates with popular preprocessing and visualization tools and includes topologically associating domain (TAD) and A/B ...[more]