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The complete chloroplast genome sequence of new species candidate of Plantago depressa Willd. in Korea (Plantaginaceae).

ABSTRACT: We presented a complete chloroplast genome of a new species candidate of Plantago depressa, Willd. named as Plantago wonjuenesis sp. nov, which is 164,946 bp long (GC ratio is 38.0%) and has four subregions: 82,985 bp of large single copy and 4,647 bp of small single-copy regions are separated by 38,657 bp of inverted repeat regions including 94 protein-coding genes (PCGs), eight rRNAs, and 38 tRNAs. Number of variations between P. wonjuenesis and P. depressa can be considered as interspecific variations. Bootstrapped phylogenetic trees constructed with conserved 78 PCGs of eleven Plantaginaceae chloroplast genomes present that P. wonjuensis is clustered with P. depressa, P. fengdouensis, and P. media.

SUBMITTER: Park J

PROVIDER: S-EPMC8204991 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Comprehensive analysis of complete chloroplast genome sequence of Plantago asiatica L. (Plantaginaceae).

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Project description:Pueraria lobata (Willd.) Ohwi is an essential traditional oriental medicine with therapeutic effects. In this study, we assembled the complete chloroplast genome of P. lobata. The total genome size was 153,442 bp in length, containing a large single-copy (LSC) region of 84,162 bp, a small single-copy (SSC) of 17,998 bp, and a pair of inverted repeats (IRs) of 25,641 bp, and possessing 35.41% GC content. In addition, the whole chloroplast genome encodes a total of 129 genes, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic tree analysis of 48 species in the family Papilionoideae of Leguminosae indicated that P. lobata was belong to Papilionoideae and closely related to the genus, Pachyrhizus, Vigna and Phaseolus.

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