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Heterozygous ANKRD17 loss-of-function variants cause a syndrome with intellectual disability, speech delay, and dysmorphism.


ABSTRACT: ANKRD17 is an ankyrin repeat-containing protein thought to play a role in cell cycle progression, whose ortholog in Drosophila functions in the Hippo pathway as a co-factor of Yorkie. Here, we delineate a neurodevelopmental disorder caused by de novo heterozygous ANKRD17 variants. The mutational spectrum of this cohort of 34 individuals from 32 families is highly suggestive of haploinsufficiency as the underlying mechanism of disease, with 21 truncating or essential splice site variants, 9 missense variants, 1 in-frame insertion-deletion, and 1 microdeletion (1.16 Mb). Consequently, our data indicate that loss of ANKRD17 is likely the main cause of phenotypes previously associated with large multi-gene chromosomal aberrations of the 4q13.3 region. Protein modeling suggests that most of the missense variants disrupt the stability of the ankyrin repeats through alteration of core structural residues. The major phenotypic characteristic of our cohort is a variable degree of developmental delay/intellectual disability, particularly affecting speech, while additional features include growth failure, feeding difficulties, non-specific MRI abnormalities, epilepsy and/or abnormal EEG, predisposition to recurrent infections (mostly bacterial), ophthalmological abnormalities, gait/balance disturbance, and joint hypermobility. Moreover, many individuals shared similar dysmorphic facial features. Analysis of single-cell RNA-seq data from the developing human telencephalon indicated ANKRD17 expression at multiple stages of neurogenesis, adding further evidence to the assertion that damaging ANKRD17 variants cause a neurodevelopmental disorder.

SUBMITTER: Chopra M 

PROVIDER: S-EPMC8206162 | biostudies-literature | 2021 Jun

REPOSITORIES: biostudies-literature

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Heterozygous ANKRD17 loss-of-function variants cause a syndrome with intellectual disability, speech delay, and dysmorphism.

Chopra Maya M   McEntagart Meriel M   Clayton-Smith Jill J   Platzer Konrad K   Shukla Anju A   Girisha Katta M KM   Kaur Anupriya A   Kaur Parneet P   Pfundt Rolph R   Veenstra-Knol Hermine H   Mancini Grazia M S GMS   Cappuccio Gerarda G   Brunetti-Pierri Nicola N   Kortüm Fanny F   Hempel Maja M   Denecke Jonas J   Lehman Anna A   Kleefstra Tjitske T   Stuurman Kyra E KE   Wilke Martina M   Thompson Michelle L ML   Bebin E Martina EM   Bijlsma Emilia K EK   Hoffer Mariette J V MJV   Peeters-Scholte Cacha C   Slavotinek Anne A   Weiss William A WA   Yip Tiffany T   Hodoglugil Ugur U   Whittle Amy A   diMonda Janette J   Neira Juanita J   Yang Sandra S   Kirby Amelia A   Pinz Hailey H   Lechner Rosan R   Sleutels Frank F   Helbig Ingo I   McKeown Sarah S   Helbig Katherine K   Willaert Rebecca R   Juusola Jane J   Semotok Jennifer J   Hadonou Medard M   Short John J   Yachelevich Naomi N   Lala Sajel S   Fernández-Jaen Alberto A   Pelayo Janvier Porta JP   Klöckner Chiara C   Kamphausen Susanne B SB   Abou Jamra Rami R   Arelin Maria M   Innes A Micheil AM   Niskakoski Anni A   Amin Sam S   Williams Maggie M   Evans Julie J   Smithson Sarah S   Smedley Damian D   de Burca Anna A   Kini Usha U   Delatycki Martin B MB   Gallacher Lyndon L   Yeung Alison A   Pais Lynn L   Field Michael M   Martin Ellenore E   Charles Perrine P   Courtin Thomas T   Keren Boris B   Iascone Maria M   Cereda Anna A   Poke Gemma G   Abadie Véronique V   Chalouhi Christel C   Parthasarathy Padmini P   Halliday Benjamin J BJ   Robertson Stephen P SP   Lyonnet Stanislas S   Amiel Jeanne J   Gordon Christopher T CT  

American journal of human genetics 20210427 6


ANKRD17 is an ankyrin repeat-containing protein thought to play a role in cell cycle progression, whose ortholog in Drosophila functions in the Hippo pathway as a co-factor of Yorkie. Here, we delineate a neurodevelopmental disorder caused by de novo heterozygous ANKRD17 variants. The mutational spectrum of this cohort of 34 individuals from 32 families is highly suggestive of haploinsufficiency as the underlying mechanism of disease, with 21 truncating or essential splice site variants, 9 misse  ...[more]

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