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Vegetation plot and trait data from phonolitic and basaltic rocks on La Palma (Canary Islands, Spain).

ABSTRACT: Geodiversity promotes biodiversity by increasing habitat heterogeneity. In times of a global biodiversity decline, data about diversity on such geological elements gains importance, also regarding conservation and restoration. In the Canary Islands, phonolitic rocks are geological elements of volcanic origin that represent additional habitat for species. In the southern part of the island La Palma, phonolite rocks can be encountered in matrices of young lava. We provide biotic and abiotic records from 60 plots of 2 m × 2 m, sampled on phonolitic and neighbouring basaltic outcrops at four different sites that cover a wide environmental gradient. The recorded parameters were species abundances (percentage cover), plant individuals' frequency (number of plant individuals per plot and species), plant growth height (in cm), and canopy diameter (in cm). Additionally, lichen cover (percentage cover) was estimated. To describe site specific characteristics, we recorded plot surface dynamics (3D rock surface), aspect, and inclination. This data set covers vegetation and trait data comparing phonolites and basalts on La Palma. It can be used for island biogeography, vegetation ecology and conservation sciences to help support fundamental research related to insular biodiversity and endemism, and to identify priority areas for protection and preservation in the Canary Islands.

SUBMITTER: Walentowitz A

PROVIDER: S-EPMC8243002 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:Two Streptomyces strains, labeled as MZ03-37T and MZ03-48, were isolated from two different samples, a mucolite-type speleothem and a microbial mat on the walls of a lava tube from La Palma Island (Canary Islands). Phylogenetic analysis based on concatenated sequences of six housekeeping genes indicated that both strains belonged to the same species. The closest relatives for both strains were Streptomyces palmae CMU-AB204T (98.71%), Streptomyces catenulae NRRL B-2342T (98.35%), and Streptomyces ramulosus NRRL B-2714T (98.35%). Multi-locus sequence analysis (MLSA), based on five house-keeping gene alleles (i.e., atpD, gyrB, recA, rpoB, and trpB), indicated that both isolated strains were closely related to S. catenulae NRRL B-2342T. Whole-genome average nucleotide identity (ANI) scores of both strains were in the threshold value for species delineation with the closest species. Both strains presented a G+C content of 72.1 mol%. MZ03-37T was light brown in substrate and white in aerial mycelium, whereas MZ03-48 developed a black aerial and substrate mycelium. No pigment diffusion was observed in both strains. They grew at 10°C-37°C (optimum 28°C-32°C) and in the presence of up to 15% (w/v) NaCl. MZ03-37T grew at pH 5-10 (optimal 6-9), whereas MZ03-48 grew at pH 4-11 (optimal 5-10). LL-Diaminopimelic acid was the main diamino acid identified. The predominant fatty acids in both strains were iso-C16:0, anteiso-C15:0, C16:0, and iso-C14:0. The major isoprenoid quinones were MK-9(H6) and MK-9(H8), and the main polar lipids were aminolipid, phospholipid, and phosphoglycolipid. In silico analyses for functional annotation predicted the presence of gene clusters involved in resistome mechanisms and in the synthesis of described antimicrobials such as linocin-M18 and curamycin, as well as different genes likely involved in mechanisms for active compound synthesis, both already described and not discovered so far. On the basis of their phylogenetic relatedness and their phenotypic and genotypic features, the strains MZ03-37T and MZ03-48 represented a novel species within the genus Streptomyces, for which the name Streptomyces benahoarensis sp. nov. is proposed. The type strain is MZ03-37T (= CECT 9805 = DSMZ 8002); and MZ03-48 (= CECT 9806 = DSMZ 8011) is a reference strain.

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Vegetation plot and trait data from phonolitic and basaltic rocks on La Palma (Canary Islands, Spain).

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