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The complete chloroplast genome sequences of the Rosa kokanica (Regel) Regel ex Juz. (Rosaceae).

ABSTRACT: Rosa kokanica is a deciduous shrub distributed in Central Asia. We determined the genomic characteristics of the complete chloroplast genome in R. kokanica with a de novo assembly strategy. The chloroplast genome was 156,802bp in length harboring 89 protein coding genes, 37 tRNA genes and eight rRNA genes. It exhibits typical quadripartite structure comprising a large single-copy (LSC) (85,899bp), a small single-copy (SSC) (18,773bp) and a pair of inverted repeats (IRs) (26,065bp). Phylogenetic analysis of 16 chloroplast genomes from Rosaceae revealed that the genus Rosa is a monophyletic group and the R. kokanica is clustered together with the congener, R. acicular.

SUBMITTER: Choi TY

PROVIDER: S-EPMC8245069 | biostudies-literature | 2021

REPOSITORIES: biostudies-literature

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The complete chloroplast genome sequences of the Rosa kokanica (Regel) Regel ex Juz. (Rosaceae).

Choi Tae-Young TY Kim Aleksey A Kim Dong-Kap DK Jung Su-Young SY Lee Soo-Rang SR

Mitochondrial DNA. Part B, Resources 20210628 8

Rosa kokanica is a deciduous shrub distributed in Central Asia. We determined the genomic characteristics of the complete chloroplast genome in R. kokanica with a de novo assembly strategy. The chloroplast genome was 156,802bp in length harboring 89 protein coding genes, 37 tRNA genes and eight rRNA genes. It exhibits typical quadripartite structure comprising a large single-copy (LSC) (85,899bp), a small single-copy (SSC) (18,773bp) and a pair of inverted repeats (IRs) (26,065bp). ...[more]

PMID: 34250237

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