Browse
Submit Data
Databases
API
Help

Dataset Information

15 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of the Ectomycorrhizal Fungus Astraeus odoratus from Northern Thailand.

ABSTRACT: We report the draft genome sequence of Astraeus odoratus, an edible ectomycorrhizal fungus from northern Thailand. The assembled genome has a size of 45.1 Mb and 13,403 annotated protein-coding genes. This reference genome will provide a better understanding of the biology of mushroom-forming ectomycorrhizal fungi in the family Diplocystidiaceae.

SUBMITTER: Kijpornyongpan T

PROVIDER: S-EPMC8248864 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea.

Project description:Sphaerosporella brunnea is a pioneer ectomycorrhizal fungus with facultative saprophytic capacities. Here, we sequenced the genome of S. brunnea strain Sb_GMNB300, which is estimated at 51.6 Mb in size with 872 assembled contigs accounting for 12,597 predicted coding genes. This genome will be useful for comparative studies of Pezizales ectomycorrhizal symbioses.

| S-EPMC6908789 | biostudies-literature

Draft Genome Sequence of Fungus Clonostachys rosea Strain YKD0085.

Project description:Here, we report the draft genome sequence of Clonostachys rosea (strain YKD0085). The functional annotation of C. rosea provides important information related to its ability to produce secondary metabolites. The genome sequence presented here builds the basis for further genome mining.

| S-EPMC4919396 | biostudies-literature

Draft Genome Sequence of the Lichenized Fungus Bacidia gigantensis

Project description:ABSTRACT The draft genome sequence of Bacidia gigantensis, a lichenized fungus in the order Lecanorales, was sequenced directly from a herbarium specimen collected from the type locality at Sleeping Giant Provincial Park in Ontario, Canada. Using long-read sequencing on the Oxford Nanopore PromethION platform, we assembled a nearly complete genome sequence.

| S-EPMC8567793 | biostudies-literature

Draft Genome Sequence of the Fungus Penicillium brasilianum MG11.

Project description:The genus Penicillium belongs to the phylum Ascomycota and includes a variety of fungal species important for food and drug production. We report the draft genome sequence of Penicillium brasilianum MG11. This strain was isolated from soil, and it was reported to produce different secondary metabolites.

| S-EPMC4559720 | biostudies-literature

Draft Genome Sequence of the Basidiomycetous Fungus Flammulina velutipes TR19.

Project description:Here, we report the draft genome sequence of Flammulina velutipes TR19, which was newly isolated from commercial strains in Japan. The genes related to fruiting body formation in the basidiomycete were identified by whole-genome analysis.

| S-EPMC4901223 | biostudies-literature

Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride.

Project description:An unknown fungus has been isolated as a contaminant of in vitro-grown fungal cultures. In an attempt to identify the contamination, we isolated the causal agent and performed whole-genome sequencing. BLAST analysis of the internal transcribed spacer (ITS) sequence against the NCBI database showed 100% identity to Trichoderma atroviride, and further alignment of the genome assembly confirmed the unknown fungus to be T. atroviride. Here, we report the draft genome sequence of a T. atroviride strain.

| S-EPMC4424285 | biostudies-literature

Draft Genome Sequence of Lichen-Forming Fungus Caloplaca flavorubescens Strain KoLRI002931.

Project description:Here we report a draft genome sequence of Caloplaca flavorubescens strain KoLRI002931, isolated from the bark of a gingko tree at Mt. Deogyu, Muju, South Korea. The genome sequence is 34,455,815 bp, with a GC content of 41.89%, consisting of 36 scaffolds.

| S-EPMC3757454 | biostudies-literature

New Draft Genome Sequence of the Ergot Disease Fungus Claviceps paspali.

Project description:Here, we report a new draft genome sequence of an isolate of the ascomycete Claviceps paspali that is responsible for ergot disease in grasses of the Paspalum genus. This new draft genome sequence will provide useful data for evaluating intraspecies and interspecies genome variation in C. paspali and other Claviceps genus members.

| S-EPMC7365795 | biostudies-literature

Draft Genome Sequence of the Aquatic Fungus Hymenoscyphus tetracladius Strain NNIBRFG329.

Project description:Hymenoscyphus tetracladius (anamorph, Articulospora tetracladia) is a common aquatic hyphomycetous fungus. Here, we report the draft genome sequence of H. tetracladius strain NNIBRFG329, which comprises 41.8?Mb in 20 scaffolds with an overall G+C content of 46.95% and an N 50 value of 3.973?Mb.

| S-EPMC6284723 | biostudies-literature

Draft Genome Sequence of the Filamentous Fungus Penicillium paxilli (ATCC 26601).

Project description:Penicillium paxilli ATCC 26601 is an asexual filamentous fungal species known for its production of the mycotoxin paxilline. We present here the 35-Mb draft genome sequence for this organism.

| S-EPMC4357747 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data