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Virgibacillus doumboii sp. nov., a halophilic bacterium isolated from the stool of a healthy child in Mali.

ABSTRACT: A moderately halophilic and strictly aerobic bacterium was isolated from a human stool as part of a study on the diagnosis of childhood malnutrition in Mali. Strain Marseille-Q1616T is a Gram-stain-positive, rod-shaped, catalase-positive and oxidase-negative bacterium. It has a genome size of 3.91 Mbp with 39.79% G+C content, which contains 3954 protein-coding genes including genes encoding phosphomycin resistance and Listeria monocytogenes, 16 rRNA genes and 64 tRNA genes. Strain Marseille-Q1616T exhibited a 96.3% 16S rRNA gene sequence similarity and shared an OrthoANI value of 70.64% (the highest observed) with Virgibacillus kekensis, the phylogenetically closest validly published species. Based on phenotypic and phylogenetic evidence and genomic average nucleotide identity values, we suggest the creation of a new species within the Virgibacillus genus, named Virgibacillus doumboii sp. nov., type strain Marseille-Q1616T (= CSURQ1616).

SUBMITTER: Konate S 

PROVIDER: S-EPMC8255231 | biostudies-literature | 2021 Jul

REPOSITORIES: biostudies-literature

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<i>Virgibacillus doumboii</i> sp. nov., a halophilic bacterium isolated from the stool of a healthy child in Mali.

Konate S S   Camara A A   Lo C I CI   Tidjani Alou M M   Hamidou Togo A A   Niare S S   Armstrong N N   Djimdé A A   Thera M A MA   Fenollar F F   Raoult D D   Million M M  

New microbes and new infections 20210427

A moderately halophilic and strictly aerobic bacterium was isolated from a human stool as part of a study on the diagnosis of childhood malnutrition in Mali. Strain Marseille-Q1616<sup>T</sup> is a Gram-stain-positive, rod-shaped, catalase-positive and oxidase-negative bacterium. It has a genome size of 3.91 Mbp with 39.79% G+C content, which contains 3954 protein-coding genes including genes encoding phosphomycin resistance and <i>Listeria monocytogenes</i>, 16 rRNA genes and 64 tRNA genes. Str  ...[more]

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