LGAAP: Leishmaniinae Genome Assembly and Annotation Pipeline.
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ABSTRACT:
SUBMITTER: Almutairi H
PROVIDER: S-EPMC8297458 | biostudies-literature | 2021 Jul
REPOSITORIES: biostudies-literature
Publications
LGAAP: <i>Leishmaniinae</i> Genome Assembly and Annotation Pipeline.
Almutairi Hatim H Urbaniak Michael D MD Bates Michelle D MD Jariyapan Narissara N Kwakye-Nuako Godwin G Thomaz-Soccol Vanete V Al-Salem Waleed S WS Dillon Rod J RJ Bates Paul A PA Gatherer Derek D
Microbiology resource announcements 20210722 29
We present the LGAAP computational pipeline, which was successfully used to assemble six genomes of the parasite subfamily <i>Leishmaniinae</i> to chromosome-scale completeness from a combination of long- and short-read sequencing data. LGAAP is open source, and we suggest that it may easily be ported for assembly of any genome of comparable size (∼35 Mb). ...[more]
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