Dataset Information

A Biomedically oriented automatically annotated Twitter COVID-19 Dataset.

ABSTRACT: The use of social media data, like Twitter, for biomedical research has been gradually increasing over the years. With the COVID-19 pandemic, researchers have turned to more nontraditional sources of clinical data to characterize the disease in near real-time, study the societal implications of interventions, as well as the sequelae that recovered COVID-19 cases present (Long-COVID). However, manually curated social media datasets are difficult to come by due to the expensive costs of manual annotation and the efforts needed to identify the correct texts. When datasets are available, they are usually very small and their annotations do not generalize well over time or to larger sets of documents. As part of the 2021 Biomedical Linked Annotation Hackathon, we release our dataset of over 120 million automatically annotated tweets for biomedical research purposes. Incorporating best practices, we identify tweets with potentially high clinical relevance. We evaluated our work by comparing several SpaCy-based annotation frameworks against a manually annotated gold-standard dataset. Selecting the best method to use for automatic annotation, we then annotated 120 million tweets and released them publicly for future downstream usage within the biomedical domain.

SUBMITTER: Hernandez LAR

PROVIDER: S-EPMC8328063 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Similar Datasets

Project description:Since the inception of the current COVID-19 pandemic, related misleading information has spread at a remarkable rate on social media, leading to serious implications for individuals and societies. Although COVID-19 looks to be ending for most places after the sharp shock of Omicron, severe new variants can emerge and cause new waves, especially if the variants can evade the insufficient immunity provided by prior infection and incomplete vaccination. Fighting the fake news that promotes vaccine hesitancy, for instance, is crucial for the success of the global vaccination programs and thus achieving herd immunity. To combat the proliferation of COVID-19-related misinformation, considerable research efforts have been and are still being dedicated to building and sharing COVID-19 misinformation detection datasets and models for Arabic and other languages. However, most of these datasets provide binary (true/false) misinformation classifications. Besides, the few studies that support multi-class misinformation classification deal with a small set of misinformation classes or mix them with situational information classes. False news stories about COVID-19 are not equal; some tend to have more sinister effects than others (e.g., fake cures and false vaccine info). This suggests that identifying the sub-type of misinformation is critical for choosing the suitable action based on their level of seriousness, ranging from assigning warning labels to the susceptible post to removing the misleading post instantly. We develop comprehensive annotation guidelines in this work that define 19 fine-grained misinformation classes. Then, we release the first Arabic COVID-19-related misinformation dataset comprising about 6.7K tweets with multi-class and multi-label misinformation annotations. In addition, we release a version of the dataset to be the first Twitter Arabic dataset annotated exclusively with six different situational information classes. Identifying situational information (e.g., caution, help-seeking) helps authorities or individuals understand the situation during emergencies. To confirm the validity of the collected data, we define three classification tasks and experiment with various machine learning and transformer-based classifiers to offer baseline results for future research. The experimental results indicate the quality and validity of the data and its suitability for constructing misinformation and situational information classification models. The results also demonstrate the superiority of AraBERT-COV19, a transformer-based model pretrained on COVID-19-related tweets, with micro-averaged F-scores of 81.6% and 78.8% for the multi-class misinformation and situational information classification tasks, respectively. Label Powerset with linear SVC achieved the best performance among the presented methods for multi-label misinformation classification with micro-averaged F-scores of 76.69%.

Dataset Information

A Biomedically oriented automatically annotated Twitter COVID-19 Dataset.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets