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Unraveling tumor-immune heterogeneity in advanced ovarian cancer uncovers immunogenic effect of chemotherapy.


ABSTRACT: In metastatic cancer, the degree of heterogeneity of the tumor microenvironment (TME) and its molecular underpinnings remain largely unstudied. To characterize the tumor-immune interface at baseline and during neoadjuvant chemotherapy (NACT) in high-grade serous ovarian cancer (HGSOC), we performed immunogenomic analysis of treatment-naive and paired samples from before and after treatment with chemotherapy. In treatment-naive HGSOC, we found that immune-cell-excluded and inflammatory microenvironments coexist within the same individuals and within the same tumor sites, indicating ubiquitous variability in immune cell infiltration. Analysis of TME cell composition, DNA copy number, mutations and gene expression showed that immune cell exclusion was associated with amplification of Myc target genes and increased expression of canonical Wnt signaling in treatment-naive HGSOC. Following NACT, increased natural killer (NK) cell infiltration and oligoclonal expansion of T cells were detected. We demonstrate that the tumor-immune microenvironment of advanced HGSOC is intrinsically heterogeneous and that chemotherapy induces local immune activation, suggesting that chemotherapy can potentiate the immunogenicity of immune-excluded HGSOC tumors.

SUBMITTER: Jimenez-Sanchez A 

PROVIDER: S-EPMC8353209 | biostudies-literature | 2020 Jun

REPOSITORIES: biostudies-literature

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Unraveling tumor-immune heterogeneity in advanced ovarian cancer uncovers immunogenic effect of chemotherapy.

Jiménez-Sánchez Alejandro A   Cybulska Paulina P   Mager Katherine LaVigne KL   Koplev Simon S   Cast Oliver O   Couturier Dominique-Laurent DL   Memon Danish D   Selenica Pier P   Nikolovski Ines I   Mazaheri Yousef Y   Bykov Yonina Y   Geyer Felipe C FC   Macintyre Geoff G   Gavarró Lena Morrill LM   Drews Ruben M RM   Gill Michael B MB   Papanastasiou Anastasios D AD   Sosa Ramon E RE   Soslow Robert A RA   Walther Tyler T   Shen Ronglai R   Chi Dennis S DS   Park Kay J KJ   Hollmann Travis T   Reis-Filho Jorge S JS   Markowetz Florian F   Beltrao Pedro P   Vargas Hebert Alberto HA   Zamarin Dmitriy D   Brenton James D JD   Snyder Alexandra A   Weigelt Britta B   Sala Evis E   Miller Martin L ML  

Nature genetics 20200601 6


In metastatic cancer, the degree of heterogeneity of the tumor microenvironment (TME) and its molecular underpinnings remain largely unstudied. To characterize the tumor-immune interface at baseline and during neoadjuvant chemotherapy (NACT) in high-grade serous ovarian cancer (HGSOC), we performed immunogenomic analysis of treatment-naive and paired samples from before and after treatment with chemotherapy. In treatment-naive HGSOC, we found that immune-cell-excluded and inflammatory microenvir  ...[more]

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