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Sphingobacterium pedocola sp. nov. a novel halotolerant bacterium isolated from agricultural soil.

ABSTRACT: A Gram-reaction-negative halotolerant bacterial strain, designated Ka21^T, was isolated from agricultural soil and characterised using a polyphasic approach to determine its taxonomic position. On the basis of 16S rRNA gene sequence analysis, highest similarity was found with Sphingobacterium alkalisoli Y3L14^T (96.72%). Cells were observed to be aerobic, non-motile rods. The isolate was found to be able to grow between 0 and 10% of NaCl concentration. The assembled genome of strain Ka21^T has a total length of 5.2 Mb with a G + C content of 41.0 mol%. According to the genome analysis, Ka21^T encodes several glycoside hydrolases that may play a role in the degradation of accumulated plant biomass in the soil. Based on phenotypic characteristics and phylogenetic analysis, it is concluded that strain Ka21^T represents a novel species in the Sphingobacterium genus for which the name Sphingobacterium pedocola sp. nov. is proposed. The type strain of the species is strain Ka21^T (= LMG 31575^T = NCAIM B.02636^T).

SUBMITTER: Toth A

PROVIDER: S-EPMC8448689 | biostudies-literature |

REPOSITORIES: biostudies-literature

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<i>Sphingobacterium prati</i> sp. nov., isolated from agricultural soil and involved in lignocellulose deconstruction.

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Draft Genome Sequence of Sphingobacterium sp. Strain PM2-P1-29, a Tetracycline-Degrading TetX-Expressing Aerobic Bacterium Isolated from Agricultural Soil.

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Flavobacterium petrolei sp. nov., a novel psychrophilic, diesel-degrading bacterium isolated from oil-contaminated Arctic soil.

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