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Extensions of Granger Causality Calculations on Brain Networks for Efficient and Accurate Seizure Focus Identification via iEEGs.

ABSTRACT: Current epilepsy surgery planning protocol determines the seizure onset zone (SOZ) through resource-intensive, invasive monitoring of ictal events. Recently, we have reported that Granger Causality (GC) maps produced from analysis of interictal iEEG recordings have potential in revealing SOZ. In this study, we investigate GC maps' network connectivity patterns to determine possible clinical correlation with patients' SOZ and resection zone (RZ). While building understanding of interictal network topography and its relationship to the RZ/SOZ, we identify algorithmic tools with potential applications in epilepsy surgery planning. These graph algorithms are retrospectively tested on data from 25 patients and compared to the neurologist-determined SOZ and surgical RZ, viewed as sources of truth. Centrality algorithms yielded statistically significant RZ rank order sums for 16 of 24 patients with RZ data, representing an improvement from prior algorithms. While SOZ results remained largely the same, this study validates the applicability of graph algorithms to RZ/SOZ detection, opening the door to further exploration of iEEG datasets. Furthermore, this study offers previously inaccessible insights into the relationship between interictal brain connectivity patterns and epileptic brain networks, utilizing the overall topology of the graphs as well as data on edge weights and quantity of edges contained in GC maps.

SUBMITTER: Yang VB

PROVIDER: S-EPMC8471554 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:BackgroundIt is a crucial task of brain science researches to explore functional connective maps of Biological Neural Networks (BNN). The maps help to deeply study the dominant relationship between the structures of the BNNs and their network functions.ResultsIn this study, the ideas of linear Granger causality modeling and causality identification are extended to those of nonlinear Granger causality modeling and network structure identification. We employed Radial Basis Functions to fit the nonlinear multivariate dynamical responses of BNNs with neuronal pulse firing. By introducing the contributions from presynaptic neurons and detecting whether the predictions for postsynaptic neurons' pulse firing signals are improved or not, we can reveal the information flows distribution of BNNs. Thus, the functional connections from presynaptic neurons can be identified from the obtained network information flows. To verify the effectiveness of the proposed method, the Nonlinear Granger Causality Identification Method (NGCIM) is applied to the network structure discovery processes of Spiking Neural Networks (SNN). SNN is a simulation model based on an Integrate-and-Fire mechanism. By network simulations, the multi-channel neuronal pulse sequence data of the SNNs can be used to reversely identify the synaptic connections and strengths of the SNNs.ConclusionsThe identification results show: for 2-6 nodes small-scale neural networks, 20 nodes medium-scale neural networks, and 100 nodes large-scale neural networks, the identification accuracy of NGCIM with the Gaussian kernel function was 100%, 99.64%, 98.64%, 98.37%, 98.31%, 84.87% and 80.56%, respectively. The identification accuracies were significantly higher than those of a traditional Linear Granger Causality Identification Method with the same network sizes. Thus, with an accumulation of the data obtained by the existing measurement methods, such as Electroencephalography, functional Magnetic Resonance Imaging, and Multi-Electrode Array, the NGCIM can be a promising network modeling method to infer the functional connective maps of BNNs.

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Extensions of Granger Causality Calculations on Brain Networks for Efficient and Accurate Seizure Focus Identification via iEEGs.

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