Dataset Information

Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae.

ABSTRACT: The subfamily Lamiinae is the most taxonomically diverse subfamily of Cerambycidae, but relationships between tribes of Lamiinae are still unresolved. In order to study the characteristics of the mitogenomes of Lamiinae and the tribal-level phylogenetic relationships, we sequenced the mitogenomes of two species representing two tribes, Agapanthia amurensis (Agapanthiini) and Moechotypa diphysis (Ceroplesini), with a total length of 15,512 bp and 15,493 bp, respectively. The gene arrangements of these two new mitogenomes were consistent with the inferred ancestral insect mitogenomes. Each species contained 37 typical mitochondrial genes and a control region (A + T-rich region), including 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and two ribosomal RNA genes (rRNAs). All PCGs initiated with the standard start codon ATN, and terminated with the complete stop codons of TAA and TAG, or incomplete stop codon T. All tRNAs could be folded into a clover-leaf secondary structure except for trnS1, in which the dihydrouridine (DHU) arm was reduced. Moreover, we studied the phylogenetic relationships between some tribes of Lamiinae based in mitochondrial PCGs in nucleotides; our results show that the relationships were as follows: (Onciderini + ((Apomecynini + Acanthocinini) + ((Ceroplesini + Agapanthiini) + ((Mesosini + Pteropliini) + ((Dorcaschematini + (Saperdini 1 + (Phytoeciini + Saperdini 2))) + (Batocerini + Lamiini)))))).

SUBMITTER: Ren Y

PROVIDER: S-EPMC8471637 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:Longhorn beetles are highly diversified and important for agriculture and health of the environment. However, the fauna and ecology of these beetles are not well known in Thailand. This study is the first to report the biodiversity, elevation, and seasonal distribution of longhorn beetles. Specimens were collected by malaise traps from 41 localities in 24 national parks throughout the country during 2006-2009. The traps were operated at each site for 12 consecutive months with a monthly service. A total of 199 morphotaxa in 36 tribes of 6 subfamilies were identified from 1376 specimens. Of these, 40.7% and 14.5% of total taxa were singletons and doubletons, respectively. The Shannon diversity index and observed species richness at Panernthung, Loei Forest Unit and Mae Fang Hotspring were high at 0.96 (30), 0.88 (50), and 0.86 (34), respectively. Local richness ranged between 3 and 50 species, while the species richness estimator showed between 6 and 1275 species. The most relatively abundant species, Nupserha lenita, Pterolophia sp.1, Oberea sp.3, Acalolepta pseudospeciosa, and Ac. rustricatrix represented 4.80%, 4.80%, 4.80%, 4.5%, and 4.43% of the species, respectively. The species with the widest distribution range of percentage of species occurrence (% SO) was Pt. sp.1 (63.4%), followed by Ac. rustricatrix (39%) and Moechotypa suffusa (39%). In a significantly negative relationship between species richness and elevation (p > 0.05, R2 = 0.04), the species richness pattern showed a hump-shaped curve that peaked at the middle elevation (501-1000 m asl). Regarding seasonal variation, most of the species occurred during the hot season (March-April) and peaked in early rainy season (May), while a low number of species were found during the mid-rainy (June-October) and cold season (November-February). Ordination analysis indicated that the distribution of most species was associated with regions and forest type, and most of the species correlated with forest located at middle and low elevation. The results of this study indicated the very high biodiversity of longhorn beetles in Thailand, which suggests that an understanding of their seasonal and elevational distribution will be of value to agriculture management and conservation. They also indicated that malaise traps are appropriate for the evaluation of biodiversity.

Project description:Longhorn beetles (coleopteraCerambycidae) have been used to identify sites of high biological diversity and conservation value in cultivated landscapes, but were rarely studied in changing landscapes of humid tropics. This study was conducted in a region of southern Yunnan, China, which was dominated by natural rainforest until 30 years ago, but is successively transformed into commercial rubber monoculture plantations since that time. The objectives were to investigate longhorn beetle species diversity and distribution in the major land use types of this landscape and to estimate the effects of an expected expansion of rubber plantations on the longhorn beetle assemblages. The results showed that tree species diversity (181 species in total) and longhorn beetle diversity (220 species in total) were closely related with no significant differences between the tree and longhorn beetles assemblages shown by similarity distance analysis. There was a highly positive relationship between the estimated species richness of longhorn beetles and the number of tree species. Individual numbers of longhorn beetles and trees were also highly positive related at the sampling sites. Non-metric multidimensional scaling revealed that the degree of canopy coverage, succession age and tree diversity explained 78.5% of the total variation in longhorn beetle assemblage composition. Natural forest sites had significantly higher numbers of species and individuals than any other type of habitat. Although young rubber plantations bear the highest longhorn beetle diversity outside forests (half of the total number of longhorn beetle species recorded in total), they can not provide permanent habitats for most of these species, because they develop into closed canopy plantations with less suitable habitat conditions. Therefore, along with an expected expansion of rubber cultivation which largely proceeds at the expense of forest areas, the habitat conditions for longhorn beetles in this region might decrease dramatically in future.

Dataset Information

Comparative Mitogenomic Analysis of Two Longhorn Beetles (Coleoptera: Cerambycidae: Lamiinae) with Preliminary Investigation into Phylogenetic Relationships of Tribes of Lamiinae.

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