Browse
Submit Data
Databases
API
Help

Dataset Information

20 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of Acinetobacter pittii OCU_Ac17, Isolated from Human Venous Blood.

ABSTRACT: Acinetobacter pittii isolate OCU_Ac17 was obtained from the venous blood of a patient at a hospital in Japan. We present its complete 4.108-Mbp genome sequence (1 chromosome plus 3 plasmids), analyzed by combining long-read (Flongle) and short-read (MiniSeq) sequencing.

SUBMITTER: Matsumoto Y

PROVIDER: S-EPMC8483698 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

Whole-Genome Sequence of Acinetobacter pittii HUMV-6483 Isolated from Human Urine.

Project description:Acinetobacter pittii strain HUMV-6483 was obtained from urine from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time sequencing, which resulted in a chromosome with 4.07 Mb and a circular contig of 112 kb. About 3,953 protein-coding genes are predicted from this assembly.

| S-EPMC5522938 | biostudies-literature

Complete Genome Sequence of Acinetobacter pittii BHS4, Isolated from Air-Conditioning Condensate in Hong Kong.

Project description:Acinetobacter pittii is widespread in the environment, and the Acinetobacter calcoaceticus-baumannii complex, to which it belongs, is a major cause of hospital-acquired pneumonia and bacteremia. A. pitti BHS4 was isolated from an air-conditioning unit in Hong Kong and its complete genome sequence (3,901,980 bp; GC content, 38.79%) established through hybrid assembly.

| S-EPMC8530085 | biostudies-literature

Draft Genome Sequence of the Environmentally Isolated Acinetobacter pittii Strain IPK_TSA6.1.

Project description:Acinetobacter pittii is an opportunistic pathogen frequently isolated from Acinetobacter infections other than those from Acinetobacter baumannii Multidrug resistance in A. pittii, including resistance to carbapenems, has been increasingly reported worldwide. Here, we report the 4.14-Mbp draft genome sequence of A. pittii IPK_TSA6.1 that was isolated from a nonhospital setting.

| S-EPMC5043554 | biostudies-literature

Complete Genome Sequence of Actinomyces hongkongensis HKU8T Isolated from Human Blood.

Project description:Members of the genus Actinomyces are strongly associated with human diseases. We present here the complete genome sequence of Actinomyces hongkongensis HKU8T, which consists of one circular chromosome. The strain characteristically contains various genes encoding for enzymes involved in arylamidase utilization.

| S-EPMC5383905 | biostudies-literature

Complete Genome Sequence of Acinetobacter schindleri SGAir0122 Isolated from Singapore Air.

Project description:Acinetobacter schindleri strain SGAir0122 was isolated from tropical air samples collected in Singapore. The prevalence of nosocomial infection caused by this Gram-negative bacterium indicates its clinical significance as an opportunistic human pathogen. Its complete genome consists of one chromosome of 3.105 Mb and a plasmid of 181 kb.

| S-EPMC6025918 | biostudies-literature

Complete Genome Sequence of Bifidobacterium scardovii Strain JCM 12489T, Isolated from Human Blood.

Project description:Bifidobacterium scardovii strain JCM 12489(T) was isolated from human blood and has the largest bifidobacterial genome reported to date. Here, we report the complete genome sequence of this organism. This paper is the first report demonstrating the fully sequenced and completely annotated genome of a B. scardovii strain.

| S-EPMC4392160 | biostudies-literature

Complete Genome Sequence of Acinetobacter sp. Strain NCu2D-2 Isolated from a Mouse.

Project description:Whole-genome sequencing of Acinetobacter sp. strain NCu2D-2, isolated from the trachea of a mouse, revealed the presence of a plasmid of 309,964 bp with little overall similarity to known plasmids and enriched in insertion sequences (ISs) closely related to IS elements known from the nosocomial pathogen Acinetobacter baumannii.

| S-EPMC5270691 | biostudies-literature

Complete Genome Sequence of Acinetobacter nosocomialis GNU001, Isolated from a Plastic-Containing Landfill.

Project description:Due to the hazard of plastic waste exposed to the environment, microorganisms capable of degrading different polymeric pollutants have gained attention. Here, we report the complete genome sequence of Acinetobacter nosocomialis GNU001, which was isolated from a landfill. The genome was composed of a circular chromosome of 3,850,149 bp and a plasmid.

| S-EPMC9872585 | biostudies-literature

Complete Genome Sequence of Acinetobacter baumannii Phage BS46.

Project description:Acinetobacter myovirus BS46 was isolated from sewage by J. S. Soothill in 1991. We have sequenced the genome of BS46 and found it to be almost unique. BS46 contains double-stranded DNA with a genome size of 94,068 bp and 176 predicted open reading frames. The gene encoding the tailspike that presumably possesses depolymerase activity toward the capsular polysaccharides of the bacterial host was identified.

| S-EPMC7256263 | biostudies-literature

Complete Genome Sequence of Acinetobacter baumannii ZW85-1.

Project description:Acinetobacter baumannii is an aerobic, nonmotile Gram-negative bacterium that causes nosocomial infections worldwide. Here, we report the complete genome sequence of Acinetobacter baumannii strain ZW85-1 and its two plasmids. One of the plasmids carries genes for NDM-1, which can hydrolyze a wide range of antibiotics.

| S-EPMC3900885 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data