Dataset Information

Strategies to Assure Optimal Trade-Offs Among Competing Objectives for the Genetic Improvement of Soybean.

ABSTRACT: Plant breeding is a decision-making discipline based on understanding project objectives. Genetic improvement projects can have two competing objectives: maximize the rate of genetic improvement and minimize the loss of useful genetic variance. For commercial plant breeders, competition in the marketplace forces greater emphasis on maximizing immediate genetic improvements. In contrast, public plant breeders have an opportunity, perhaps an obligation, to place greater emphasis on minimizing the loss of useful genetic variance while realizing genetic improvements. Considerable research indicates that short-term genetic gains from genomic selection are much greater than phenotypic selection, while phenotypic selection provides better long-term genetic gains because it retains useful genetic diversity during the early cycles of selection. With limited resources, must a soybean breeder choose between the two extreme responses provided by genomic selection or phenotypic selection? Or is it possible to develop novel breeding strategies that will provide a desirable compromise between the competing objectives? To address these questions, we decomposed breeding strategies into decisions about selection methods, mating designs, and whether the breeding population should be organized as family islands. For breeding populations organized into islands, decisions about possible migration rules among family islands were included. From among 60 possible strategies, genetic improvement is maximized for the first five to 10 cycles using genomic selection and a hub network mating design, where the hub parents with the largest selection metric make large parental contributions. It also requires that the breeding populations be organized as fully connected family islands, where every island is connected to every other island, and migration rules allow the exchange of two lines among islands every other cycle of selection. If the objectives are to maximize both short-term and long-term gains, then the best compromise strategy is similar except that the mating design could be hub network, chain rule, or a multi-objective optimization method-based mating design. Weighted genomic selection applied to centralized populations also resulted in the realization of the greatest proportion of the genetic potential of the founders but required more cycles than the best compromise strategy.

SUBMITTER: Ramasubramanian V

PROVIDER: S-EPMC8497982 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Similar Datasets

Project description:The Paris Agreement promotes forest management as a pathway towards halting climate warming through the reduction of carbon dioxide (CO2) emissions1. However, the climate benefits from carbon sequestration through forest management may be reinforced, counteracted or even offset by concurrent management-induced changes in surface albedo, land-surface roughness, emissions of biogenic volatile organic compounds, transpiration and sensible heat flux2-4. Consequently, forest management could offset CO2 emissions without halting global temperature rise. It therefore remains to be confirmed whether commonly proposed sustainable European forest-management portfolios would comply with the Paris Agreement-that is, whether they can reduce the growth rate of atmospheric CO2, reduce the radiative imbalance at the top of the atmosphere, and neither increase the near-surface air temperature nor decrease precipitation by the end of the twenty-first century. Here we show that the portfolio made up of management systems that locally maximize the carbon sink through carbon sequestration, wood use and product and energy substitution reduces the growth rate of atmospheric CO2, but does not meet any of the other criteria. The portfolios that maximize the carbon sink or forest albedo pass only one-different in each case-criterion. Managing the European forests with the objective of reducing near-surface air temperature, on the other hand, will also reduce the atmospheric CO2 growth rate, thus meeting two of the four criteria. Trade-off are thus unavoidable when using European forests to meet climate objectives. Furthermore, our results demonstrate that if present-day forest cover is sustained, the additional climate benefits achieved through forest management would be modest and local, rather than global. On the basis of these findings, we argue that Europe should not rely on forest management to mitigate climate change. The modest climate effects from changes in forest management imply, however, that if adaptation to future climate were to require large-scale changes in species composition and silvicultural systems over Europe5,6, the forests could be adapted to climate change with neither positive nor negative climate effects.

Dataset Information

Strategies to Assure Optimal Trade-Offs Among Competing Objectives for the Genetic Improvement of Soybean.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets