Browse
Submit Data
Databases
API
Help

Dataset Information

27 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Distinct Kinematic Adjustments over Multiple Timescales Accompany Locomotor Skill Development in Mice.

ABSTRACT: Robust locomotion is critical to many species' survival, yet the mechanisms by which efficient locomotion is learned and maintained are poorly understood. In mice, a common paradigm for assaying locomotor learning is the rotarod task, in which mice learn to maintain balance atop of an accelerating rod. However, the standard metric for learning in this task is improvements in latency to fall, which gives little insight into the rich kinematic adjustments that accompany locomotor learning. In this study, we developed a rotarod-like task called the RotaWheel in which changes in paw kinematics are tracked using high-speed cameras as mice learn to stay atop an accelerating wheel. Using this device, we found that learning was accompanied by stereotyped progressions of paw kinematics that correlated with early, intermediate, and late stages of performance. Within the first day, mice sharpened their interlimb coordination using a timed pause in the forward swing of their forepaws. Over the next several days, mice reduced their stride length and took shorter, quicker steps. By the second week of training, mice began to use a more variable locomotor strategy, where consecutive overshoots or undershoots in strides were selected across paws to drive forward and backward exploration of the wheel. Collectively, our results suggest that mouse locomotor learning occurs through multiple mechanisms evolving over separate time courses and involving distinct corrective actions. These data provide insights into the kinematic strategies that accompany locomotor learning and establish an experimental platform for studying locomotor skill learning in mice.

SUBMITTER: Nguyen KP

PROVIDER: S-EPMC8561674 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

Expectations developed over multiple timescales facilitate visual search performance.

Project description:Our perception of the world is strongly influenced by our expectations, and a question of key importance is how the visual system develops and updates its expectations through interaction with the environment. We used a visual search task to investigate how expectations of different timescales (from the last few trials to hours to long-term statistics of natural scenes) interact to alter perception. We presented human observers with low-contrast white dots at 12 possible locations equally spaced on a circle, and we asked them to simultaneously identify the presence and location of the dots while manipulating their expectations by presenting stimuli at some locations more frequently than others. Our findings suggest that there are strong acuity differences between absolute target locations (e.g., horizontal vs. vertical) and preexisting long-term biases influencing observers' detection and localization performance, respectively. On top of these, subjects quickly learned about the stimulus distribution, which improved their detection performance but caused increased false alarms at the most frequently presented stimulus locations. Recent exposure to a stimulus resulted in significantly improved detection performance and significantly more false alarms but only at locations at which it was more probable that a stimulus would be presented. Our results can be modeled and understood within a Bayesian framework in terms of a near-optimal integration of sensory evidence with rapidly learned statistical priors, which are skewed toward the very recent history of trials and may help understanding the time scale of developing expectations at the neural level.

| S-EPMC4511121 | biostudies-literature

Diversification of bacterial genome content through distinct mechanisms over different timescales.

Project description:Bacterial populations often consist of multiple co-circulating lineages. Determining how such population structures arise requires understanding what drives bacterial diversification. Using 616 systematically sampled genomes, we show that Streptococcus pneumoniae lineages are typically characterized by combinations of infrequently transferred stable genomic islands: those moving primarily through transformation, along with integrative and conjugative elements and phage-related chromosomal islands. The only lineage containing extensive unique sequence corresponds to a set of atypical unencapsulated isolates that may represent a distinct species. However, prophage content is highly variable even within lineages, suggesting frequent horizontal transmission that would necessitate rapidly diversifying anti-phage mechanisms to prevent these viruses sweeping through populations. Correspondingly, two loci encoding Type I restriction-modification systems able to change their specificity over short timescales through intragenomic recombination are ubiquitous across the collection. Hence short-term pneumococcal variation is characterized by movement of phage and intragenomic rearrangements, with the slower transfer of stable loci distinguishing lineages.

| S-EPMC4263131 | biostudies-literature

Distinct roles for GABA across multiple timescales in mammalian circadian timekeeping.

Project description:The suprachiasmatic nuclei (SCN), the central circadian pacemakers in mammals, comprise a multiscale neuronal system that times daily events. We use recent advances in graphics processing unit computing to generate a multiscale model for the SCN that resolves cellular electrical activity down to the timescale of individual action potentials and the intracellular molecular events that generate circadian rhythms. We use the model to study the role of the neurotransmitter GABA in synchronizing circadian rhythms among individual SCN neurons, a topic of much debate in the circadian community. The model predicts that GABA signaling has two components: phasic (fast) and tonic (slow). Phasic GABA postsynaptic currents are released after action potentials, and can both increase or decrease firing rate, depending on their timing in the interspike interval, a modeling hypothesis we experimentally validate; this allows flexibility in the timing of circadian output signals. Phasic GABA, however, does not significantly affect molecular timekeeping. The tonic GABA signal is released when cells become very excited and depolarized; it changes the excitability of neurons in the network, can shift molecular rhythms, and affects SCN synchrony. We measure which neurons are excited or inhibited by GABA across the day and find GABA-excited neurons are synchronized by-and GABA-inhibited neurons repelled from-this tonic GABA signal, which modulates the synchrony in the SCN provided by other signaling molecules. Our mathematical model also provides an important tool for circadian research, and a model computational system for the many multiscale projects currently studying brain function.

| S-EPMC4517259 | biostudies-literature

The Same Hippocampal CA1 Population Simultaneously Codes Temporal Information over Multiple Timescales.

Project description:It has long been hypothesized that a primary function of the hippocampus is to discover and exploit temporal relationships between events. Previously, it has been reported that sequences of "time cells" in the hippocampus extend for tens of seconds. Other studies have shown that neuronal firing in the hippocampus fluctuates over hours and days. Both of these mechanisms could enable temporal encoding of events over very different timescales. However, thus far, these two classes of phenomena have never been observed simultaneously, which is necessary to ascribe broad-range temporal coding to the hippocampus. Using in vivo calcium imaging in unrestrained mice, we observed sequences of hippocampal neurons that bridged a 10 s delay. Similar sequences were observed over multiple days, but the set of neurons participating in those sequences changed gradually. Thus, the same population of neurons that encodes temporal information over seconds can also be used to distinguish periods of time over much longer timescales. These results unify two previously separate paradigms of temporal processing in the hippocampus that support episodic memory.

| S-EPMC5964012 | biostudies-literature

Common kinematic synergies of various human locomotor behaviours.

Project description:Humans show a variety of locomotor behaviours in daily living, varying in locomotor modes and interaction styles with the external environment. However, how this excellent motor ability is formed, whether there are some invariants underlying various locomotor behaviours and simplifying their generation, and what factors contribute to the invariants remain unclear. Here, we find three common kinematic synergies that form the six joint motions of one lower limb during walking, running, hopping and sitting-down-standing-up (movement variance accounted for greater than 90%), through identifying the coordination characteristics of 36 lower limb motor tasks in diverse environments. This finding supports the notion that humans simplify the generation of various motor behaviours through re-using several basic motor modules, rather than developing entirely new modules for each behaviour. Moreover, a potential link is also found between these synergies and the unique biomechanical characteristics of the human musculoskeletal system (muscular-articular connective architecture and bone shape), and the patterns of inter-joint coordination are consistent with the energy-saving mechanism in locomotion by using biarticular muscles as efficient mechanical energy transducers between joints. Altogether, our work helps understand the formation mechanisms of human locomotion from a holistic viewpoint and evokes inspirations for the development of artificial limbs imitating human motor ability.

| S-EPMC8059590 | biostudies-literature

The Human Motor System Supports Sequence-Specific Representations over Multiple Training-Dependent Timescales.

Project description:Motor sequence learning is associated with increasing and decreasing motor system activity. Here, we ask whether sequence-specific activity is contingent upon the time interval and absolute amount of training over which the skill is acquired. We hypothesize that within each motor region, the strength of any sequence representation is a non-linear function that can be characterized by 3 timescales. We had subjects train for 6 weeks and measured brain activity with functional magnetic resonance imaging. We used repetition suppression (RS) to isolate sequence-specific representations while controlling for effects related to kinematics and general task familiarity. Following a baseline training session, primary and secondary motor regions demonstrated rapidly increasing RS. With continued training, there was evidence for skill-specific efficiency, characterized by a dramatic decrease in motor system RS. In contrast, after performance had reached a plateau, further training led to a pattern of slowly increasing RS in the contralateral sensorimotor cortex, supplementary motor area, ventral premotor cortex, and anterior cerebellum consistent with skill-specific specialization. Importantly, many motor areas show changes involving more than 1 of these 3 timescales, underscoring the capacity of the motor system to flexibly represent a sequence based on the amount of prior experience.

| S-EPMC4747644 | biostudies-literature

Ramping Dynamics in the Frontal Cortex Unfold Over Multiple Timescales During Motor Planning.

Project description:Plans are formulated and refined over the period leading to their execution, ensuring that the appropriate behavior is enacted at just the right time. While existing evidence suggests that memory circuits convey the passage of time through diverse neuronal responses, it remains unclear whether the neural circuits involved in planning behavior exhibit analogous temporal dynamics. Using publicly available data, we analyzed how activity in the frontal motor cortex evolves during motor planning. Individual neurons exhibited diverse ramping activity throughout a delay interval that preceded a planned movement. The collective activity of these neurons was useful for making temporal predictions that became increasingly precise as the movement time approached. This temporal diversity gave rise to a spectrum of encoding patterns, ranging from stable to dynamic representations of the upcoming movement. Our results indicate that neural activity unfolds over multiple timescales during motor planning, suggesting a shared mechanism in the brain for processing temporal information related to both past memories and future plans.

| S-EPMC10871223 | biostudies-literature

Kinematic synergies in over-ground slip recovery outcomes: Distinct strategies or a single strategy?

Project description:BackgroundAfter experiencing an unexpected slip perturbation, individuals' behavioral performance can be classified into three categories: recovery, feet-forward fall, and split fall. Researchers are uncertain whether these differences in slip outcomes are due to distinct strategies or part of a single strategy.Research questionWhether older adults with different behavioral outcomes during their novel slip have different kinematic synergies?MethodsThe kinematic synergies were extracted from segment angles in 87 participants using principal component analysis (PCA). The first two principal components (PC1 and PC2) in pre-slip, early-reactive, and late-reactive phases were compared across different slip outcomes.ResultsResults showed that the kinematic synergies in pre-slip and early-reactive phases are highly consistent among the three outcomes (recovery, split fall, and feet-forward fall). For the late-reactive phase, both split falls and feet-forward falls showed different kinematics synergies from recoveries.SignificanceOur findings indicated that a single strategy might be used for different slip outcomes in the pre-slip and early-reactive phases, while distinct strategies were used by fallers compared to recovered individuals. Specifically, larger trunk flexion in pre-slip phase, larger knee flexion and plantar flexion of the slipping limb in both early-reactive and late-reactive phase, and larger knee extension of the recovery limb in late-reactive phase would lower the fall risk. This study would help to assess the vulnerabilities in control strategy, according to which individualized treatment could be provided to reduce predisposition to specific types of falls.

| S-EPMC8368075 | biostudies-literature

Deviation from the matching law reflects an optimal strategy involving learning over multiple timescales.

Project description:Behavior deviating from our normative expectations often appears irrational. For example, even though behavior following the so-called matching law can maximize reward in a stationary foraging task, actual behavior commonly deviates from matching. Such behavioral deviations are interpreted as a failure of the subject; however, here we instead suggest that they reflect an adaptive strategy, suitable for uncertain, non-stationary environments. To prove it, we analyzed the behavior of primates that perform a dynamic foraging task. In such nonstationary environment, learning on both fast and slow timescales is beneficial: fast learning allows the animal to react to sudden changes, at the price of large fluctuations (variance) in the estimates of task relevant variables. Slow learning reduces the fluctuations but costs a bias that causes systematic behavioral deviations. Our behavioral analysis shows that the animals solved this bias-variance tradeoff by combining learning on both fast and slow timescales, suggesting that learning on multiple timescales can be a biologically plausible mechanism for optimizing decisions under uncertainty.

| S-EPMC6443814 | biostudies-literature

Patterns of pollen and nectar foraging specialization by bumblebees over multiple timescales using RFID.

Project description:The ecological success of social insects is frequently ascribed to improvements in task performance due to division of labour amongst workers. While much research has focused on improvements associated with lifetime task specialization, members of colonies can specialize on a given task over shorter time periods. Eusocial bees in particular must collect pollen and nectar rewards to survive, but most workers appear to mix collection of both rewards over their lifetimes. We asked whether bumblebees specialize over timescales shorter than their lifetime. We also explored factors that govern such patterns, and asked whether reward specialists made more foraging bouts than generalists. In particular, we described antennal morphology and size of all foragers in a single colony and related these factors to each forager's complete foraging history, obtained using radio frequency identification (RFID). Only a small proportion of foragers were lifetime specialists; nevertheless, >50% of foragers specialized daily on a given reward. Contrary to expectations, daily and lifetime reward specialists were not better foragers (being neither larger nor making more bouts); larger bees with more antennal olfactory sensilla made more bouts, but were not more specialized. We discuss causes and functions of short and long-term patterns of specialization for bumblebee colonies.

| S-EPMC5299450 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data