Browse
Submit Data
Databases
API
Help

Dataset Information

10 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Ecological changes have driven biotic exchanges across the Indian Ocean.

ABSTRACT: The Indian Ocean has a complex geological history that has drawn the attention of naturalists for almost a century now. Due to its tectonic history, many geological elements and processes have been evoked to explain the exchange of species between landmasses. Here, we revisited previous studies on twenty-three taxa to investigate trends across time since the Gondwana breakup. We investigated these datasets by applying a time-calibrated Bayesian framework to them and reconstructing their ancestral ranges. We conclude that ecological transformations have presented opportunities for the establishment of migrants. The role of donating and receiving migrants has shifted several times according to these transformations. Time-specific trends show weak evidence for the stepping-stones commonly suggested as physical routes between landmasses. However, before its collision with Asia, India may have served as an intermediary for such exchanges.

SUBMITTER: Bernardes SC

PROVIDER: S-EPMC8640032 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

GS112 Indian Ocean

Project description:We are making tests with this tool

| PRJEB7460 | ENA

Glacial changes in tropical climate amplified by the Indian Ocean.

Project description:The mechanisms driving glacial-interglacial changes in the climate of the Indo-Pacific warm pool are poorly understood. Here, we address this question by combining paleoclimate proxies with model simulations of the Last Glacial Maximum climate. We find evidence of two mechanisms explaining key patterns of ocean cooling and rainfall change interpreted from proxy data. Exposure of the Sahul shelf excites a positive ocean-atmosphere feedback involving a stronger surface temperature gradient along the equatorial Indian Ocean and a weaker Walker circulation-a response explaining the drier/wetter dipole across the basin. Northern Hemisphere cooling by ice sheet albedo drives a monsoonal retreat across Africa and the Arabian Peninsula-a response that triggers a weakening of the Indian monsoon via cooling of the Arabian Sea and associated reductions in moisture supply. These results demonstrate the importance of air-sea interactions in the Indian Ocean, amplifying externally forced climate changes over a large part of the tropics.

| S-EPMC6291310 | biostudies-literature

Biotic and human vulnerability to projected changes in ocean biogeochemistry over the 21st century.

Project description:Ongoing greenhouse gas emissions can modify climate processes and induce shifts in ocean temperature, pH, oxygen concentration, and productivity, which in turn could alter biological and social systems. Here, we provide a synoptic global assessment of the simultaneous changes in future ocean biogeochemical variables over marine biota and their broader implications for people. We analyzed modern Earth System Models forced by greenhouse gas concentration pathways until 2100 and showed that the entire world's ocean surface will be simultaneously impacted by varying intensities of ocean warming, acidification, oxygen depletion, or shortfalls in productivity. In contrast, only a small fraction of the world's ocean surface, mostly in polar regions, will experience increased oxygenation and productivity, while almost nowhere will there be ocean cooling or pH elevation. We compiled the global distribution of 32 marine habitats and biodiversity hotspots and found that they would all experience simultaneous exposure to changes in multiple biogeochemical variables. This superposition highlights the high risk for synergistic ecosystem responses, the suite of physiological adaptations needed to cope with future climate change, and the potential for reorganization of global biodiversity patterns. If co-occurring biogeochemical changes influence the delivery of ocean goods and services, then they could also have a considerable effect on human welfare. Approximately 470 to 870 million of the poorest people in the world rely heavily on the ocean for food, jobs, and revenues and live in countries that will be most affected by simultaneous changes in ocean biogeochemistry. These results highlight the high risk of degradation of marine ecosystems and associated human hardship expected in a future following current trends in anthropogenic greenhouse gas emissions.

| S-EPMC3797030 | biostudies-literature

The ecological connectivity of whale shark aggregations in the Indian Ocean: a photo-identification approach.

Project description:Genetic and modelling studies suggest that seasonal aggregations of whale sharks (Rhincodon typus) at coastal sites in the tropics may be linked by migration. Here, we used photo-identification (photo-ID) data collected by both citizen scientists and researchers to assess the connectedness of five whale shark aggregation sites across the entire Indian Ocean at timescales of up to a decade. We used the semi-automated program I3S (Individual Interactive Identification System) to compare photographs of the unique natural marking patterns of individual whale sharks collected from aggregations at Mozambique, the Seychelles, the Maldives, Christmas Island (Australia) and Ningaloo Reef (Australia). From a total of 6519 photos, we found no evidence of connectivity of whale shark aggregations at ocean-basin scales within the time frame of the study and evidence for only limited connectivity at regional (hundreds to thousands of kilometres) scales. A male whale shark photographed in January 2010 at Mozambique was resighted eight months later in the Seychelles and was the only one of 1724 individuals in the database to be photographed at more than one site. On average, 35% of individuals were resighted at the same site in more than one year. A Monte Carlo simulation study showed that the power of this photo-ID approach to document patterns of emigration and immigration was strongly dependent on both the number of individuals identified in aggregations and the size of resident populations.

| S-EPMC5180127 | biostudies-literature

Altered tropical seascapes influence patterns of fish assemblage and ecological functions in the Western Indian Ocean.

Project description:The arrangement and composition of habitats within landscapes and fine-scale habitat characteristics influence community structure and ecological processes. These aspects can be altered by anthropogenic activities, thus influencing associated assemblages. Farming of macroalgae is a common practice in tropical settings and alters the natural composition of seascapes by introducing monoculture patches. The farmed macroalgae may also differ in palatability compared to naturally-occurring macroalgae, influencing herbivory. This study assessed how these farms may differ from natural macroalgal beds in terms of habitat heterogeneity, fish assemblages, and herbivory. We surveyed fish assemblages and deployed macroalgal assays within macroalgal beds, farms and at varying distances from these habitats near Mafia Island, Tanzania. Fish composition and herbivory differed between the habitats likely due to different macrophyte species richness, underlying hard substrate in natural macroalgal beds, and high abundance of browsers nearby the farms. Additionally, fish assemblage patterns and herbivory were not consistent across the seascapes and varied with distance from the focal habitats possibly due to the presence of other habitats. The results suggest alterations of seascapes by farming practices may have consequences on fish assemblages and the ecological functions performed, thus positioning of farms should be carefully considered in management and conservation plans.

| S-EPMC7385177 | biostudies-literature

Indian Ocean seawater sample

Project description:Indian Ocean seawater sample Raw sequence reads

| PRJNA934765 | ENA

Recent changes in atmospheric input and primary productivity in the north Indian Ocean.

Project description:Global oceanic regions are rapidly changing in terms of their temperature, oxygen, heat content, salinity and biogeochemistry. Since the biogeochemistry of the oceans is important and pivotal for global food production, and a major part of the world population relies on marine resources for their daily life and livelihood, it is imperative to monitor and find the spatio-temporal changes in the primary productivity of oceans. Here, we estimate the changes in Chlorophyll-a (Chl-a) and Net Primary Productivity (NPP) in the north Indian Ocean (NIO) basins of Bay of Bengal and Arabian Sea for the period 1998-2019. We find a substantial reduction of NPP in NIO since 1998 (-0.048 mg m-3 day-1 yr-1) and the increase in sea surface temperature (SST) (+0.02 °C yr-1) is the primary driver of this change. Furthermore, there is a significant (10-20%) change in the air mass or dust transport to NIO from the period Decade 1 (1998-2008) to Decade 2 (2009-2019). This change in air mass trajectories has also altered NPP in both basins through the changes in nutrient input and associated biogeochemistry. Henceforth, this study cautions the changes in primary productivity of NIO, and suggests regular assessments and continuous monitoring of the physical and biological processes from a perspective of food security and ecosystem dynamics.

| S-EPMC10362137 | biostudies-literature

Basin-wide sea level coherency in the tropical Indian Ocean driven by Madden-Julian Oscillation.

Project description:Changes in sea level may be attributed either to barotropic (involving the entire water column) or baroclinic processes (governed by stratification). It has been widely accepted that barotropic sea level changes in the tropics are insignificant at intraseasonal time scales (periods of 30-80 days). Based on bottom pressure records, we present evidence for significant basin-wide barotropic sea level variability in the tropical Indian Ocean during December-April with standard deviations amounting to ∼30-60% of the standard deviation in total intraseasonal sea level variability. The origin of this variability is linked to a small patch of wind over the Eastern Indian Ocean, associated with boreal winter Madden-Julian Oscillations (MJO). These large fluctuations are likely to play a prominent role in the intraseasonal sea level and mass budgets. Because of their much faster propagation than baroclinic processes, they allow the basin to adjust to climatic perturbations much more rapidly than was previously thought.

| S-EPMC6425029 | biostudies-literature

Adaptive sequence evolution is driven by biotic stress in a pair of orchid species (Dactylorhiza) with distinct ecological optima.

Project description:The orchid family is the largest in the angiosperms, but little is known about the molecular basis of the significant variation they exhibit. We investigate here the transcriptomic divergence between two European terrestrial orchids, Dactylorhiza incarnata and Dactylorhiza fuchsii, and integrate these results in the context of their distinct ecologies that we also document. Clear signals of lineage-specific adaptive evolution of protein-coding sequences are identified, notably targeting elements of biotic defence, including both physical and chemical adaptations in the context of divergent pools of pathogens and herbivores. In turn, a substantial regulatory divergence between the two species appears linked to adaptation/acclimation to abiotic conditions. Several of the pathways affected by differential expression are also targeted by deviating post-transcriptional regulation via sRNAs. Finally, D. incarnata appears to suffer from insufficient sRNA control over the activity of RNA-dependent DNA polymerase, resulting in increased activity of class I transposable elements and, over time, in larger genome size than that of D. fuchsii. The extensive molecular divergence between the two species suggests significant genomic and transcriptomic shock in their hybrids and offers insights into the difficulty of coexistence at the homoploid level. Altogether, biological response to selection, accumulated during the history of these orchids, appears governed by their microenvironmental context, in which biotic and abiotic pressures act synergistically to shape transcriptome structure, expression and regulation.

| S-EPMC5518283 | biostudies-literature

Western Indian Ocean giant tortoises

Project description:Western Indian Ocean giant tortoises

| PRJEB51299 | ENA