Dataset Information

The mitochondrial genomes of two Gryllus crickets (Grylloidea: Gryllidae) via RNA-seq.

ABSTRACT: Here, we used RNA-seq reads to assemble the complete mitochondrial genomes of the spring field cricket, Gryllus veletis, and the variable field cricket, Gryllus lineaticeps. The mitochondrial genomes of G. veletis (15,686 bp, MW322713) and G. lineaticeps (15,607 bp, MW315773) each contain the expected 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a large control (D-loop) region. The arrangements of these features were similar for both species and consistent with other closely related Orthoptera. A phylogenetic analysis of the mitochondrial genome sequences revealed that G. veletis and G. lineaticeps cluster with the other Gryllus species and all reside in a clade with the Gryllidae.

SUBMITTER: Torson AS

PROVIDER: S-EPMC8725904 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

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The mitochondrial genomes of two Gryllus crickets (Grylloidea: Gryllidae) via RNA-seq.

Torson Alex S AS Hicks Alexandra M A AMA Baragar Claire E CE Smith David R DR Sinclair Brent J BJ

Mitochondrial DNA. Part B, Resources 20211223 1

Here, we used RNA-seq reads to assemble the complete mitochondrial genomes of the spring field cricket, Gryllus veletis, and the variable field cricket, Gryllus lineaticeps. The mitochondrial genomes of G. veletis (15,686 bp, MW322713) and G. lineaticeps (15,607 bp, MW315773) each contain the expected 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a large control (D-loop) region. The arrangements of these features were similar for both sp ...[more]

PMID: 34993327

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Project description:A large percentage of eukaryotic genomes consist of repetitive DNA that plays an important role in the organization, size and evolution. In the case of crickets, chromosomal variability has been found using classical cytogenetics, but almost no information concerning the organization of their repetitive DNAs is available. To better understand the chromosomal organization and diversification of repetitive DNAs in crickets, we studied the chromosomes of two Gryllidae species with highly divergent karyotypes, i.e., 2n(♂) = 29,X0 (Gryllus assimilis) and 2n = 9, neo-X1X2Y (Eneoptera surinamensis). The analyses were performed using classical cytogenetic techniques, repetitive DNA mapping and genome-size estimation. Conserved characteristics were observed, such as the occurrence of a small number of clusters of rDNAs and U snDNAs, in contrast to the multiple clusters/dispersal of the H3 histone genes. The positions of U2 snDNA and 18S rDNA are also conserved, being intermingled within the largest autosome. The distribution and base-pair composition of the heterochromatin and repetitive DNA pools of these organisms differed, suggesting reorganization. Although the microsatellite arrays had a similar distribution pattern, being dispersed along entire chromosomes, as has been observed in some grasshopper species, a band-like pattern was also observed in the E. surinamensis chromosomes, putatively due to their amplification and clustering. In addition to these differences, the genome of E. surinamensis is approximately 2.5 times larger than that of G. assimilis, which we hypothesize is due to the amplification of repetitive DNAs. Finally, we discuss the possible involvement of repetitive DNAs in the differentiation of the neo-sex chromosomes of E. surinamensis, as has been reported in other eukaryotic groups. This study provided an opportunity to explore the evolutionary dynamics of repetitive DNAs in two non-model species and will contribute to the understanding of chromosomal evolution in a group about which little chromosomal and genomic information is known.

Project description:Gryllus madagascarensis (Orthoptera: Gryllidae) is a cricket species that shows promise to mitigate food insecurity and malnutrition. But whether this species will accept low- to no-cost weeds and agro by-products as feed, and how these feeds affect its performance, remains unknown. This study assessed the acceptability of 66 weed species and agro by-products (derived from a single plant species) by adult G. madagascarensis and compared the results to a reference feed (chicken feed). We further examined how the 11 top acceptable single plant products affected growth parameters of G. madagascarensis. The parameters assessed included development, survivorship, body mass and body length and reproductive fitness of the crickets on each of these diets. Finally, the costs of the 11 top accepted single plant products were compared. Our results demonstrated that the cricket accepted all 66 single plant products at varying degrees. Tropical white morning glory (Ipomoea alba), cassava tops (Manhot esculentum), taro leaves (Colocasia esculenta), cowpea bran (Vigna unguiculata), American hog-peanut (Afroamphica africana), gallant soldier (Galinsoga parviflora), wheat bran (Triticum aestivum), glycine (Neonotonia wightii), silver leaf Desmodium (Desmodium uncinatum), maize bran (Zea mays) and rice bran (Oryza sativa) were the most accepted. The analysed nutrient content varied across the top 11 accepted single plant products and the reference feed. The shortest development and highest survival rate were recorded with gallant soldier and cowpea bran powders. Wet body mass and body length were highly impacted by various single plant products tested compared to the reference feed. Reproductive parameters were significantly briefer on tropical white morning glory compared to other feeds and the reference diet. Single plant products cost two- to four-fold less than reference feed. The findings are valuable for developing blended diets that balance performance, cost and availability for household and commercial production of crickets as a "green" technology for producing edible sources of protein.

Dataset Information

The mitochondrial genomes of two Gryllus crickets (Grylloidea: Gryllidae) via RNA-seq.

Publications

The mitochondrial genomes of two <i>Gryllus</i> crickets (Grylloidea: Gryllidae) via RNA-seq.

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