Dataset Information

MinoTour, real-time monitoring and analysis for nanopore sequencers.

ABSTRACT:

Summary

MinoTour offers a LIMS system for Oxford Nanopore Technology sequencers, with real-time metrics and analysis available permanently for review. Integration of unique real-time automated analysis can reduce the time required to answer biological questions, including mapping and classification of sequence whilst a run is in progress. Real-time sequence data requires new methods of analysis which do not wait for the completion of a run and MinoTour provides a framework to allow users to exploit these features.

Availability and implementation

Source code and documentation are available at https://github.com/LooseLab/minotourcli and https://github.com/LooseLab/minotourapp. Docker images are available from https://hub.docker.com/r/adoni5/, and can be installed using a preconfigured docker-compose script at https://github.com/LooseLab/minotour-docker. An example server is available at http://137.44.59.170.

Supplementary information

Supplementary data are available at Bioinformatics online.

SUBMITTER: Munro R

PROVIDER: S-EPMC8796371 | biostudies-literature |

REPOSITORIES: biostudies-literature

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