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Towards more effective beryllium chelation: an investigation of second-sphere hydrogen bonding.

ABSTRACT: A comparative study between three experimentally known beryllium chelators (EDTA, NTP, and 10-HBQS) and two tetradentate tripodal di-pyridine-based receptors (HL and HL-NH₂), specifically designed to bind Be²⁺ cations, has been undertaken in the aqueous phase at the B3LYP/6-311++G(d,p) computational level. The relative binding energies of these five ligand systems to a variety of first row and pre-transition metal cations have been calculated, specifically to investigate their binding strength to Be²⁺ and the binding enhancement that a second sphere hydrogen bonding interaction could afford to the pyridyl based systems. The complexes of EDTA were calculated to have the highest average binding energy; followed by those of NTP, HL-NH₂, HL, and finally 10-HBQS. The calculated binding energy of the HL-NH₂Be complex, which includes second sphere interactions, was found to be almost 9% greater than the HL Be complex, with an average binding energy increase of 13.5% observed across all metals upon inclusion of second sphere hydrogen bonding.

SUBMITTER: Dais TN

PROVIDER: S-EPMC9057475 | biostudies-literature | 2020 Nov

REPOSITORIES: biostudies-literature

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Towards more effective beryllium chelation: an investigation of second-sphere hydrogen bonding.

Dais Tyson N TN Nixon David J DJ Brothers Penelope J PJ Henderson William W Plieger Paul G PG

RSC advances 20201104 66

A comparative study between three experimentally known beryllium chelators (EDTA, NTP, and 10-HBQS) and two tetradentate tripodal di-pyridine-based receptors (HL and HL-NH<sub>2</sub>), specifically designed to bind Be<sup>2+</sup> cations, has been undertaken in the aqueous phase at the B3LYP/6-311++G(d,p) computational level. The relative binding energies of these five ligand systems to a variety of first row and pre-transition metal cations have been calculated, specifically to investigate th ...[more]

PMID: 35520866

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Project description:Transforming CO2 into valuable materials is an important reaction in catalysis, especially because CO2 concentrations in the atmosphere have been growing steadily due to extensive fossil fuel usage. From an environmental perspective, reduction of CO2 to valuable materials should be catalyzed by an environmentally benign catalyst and avoid the use of heavy transition-metal ions. In this work, we present a computational study into a novel iron(I) porphyrin catalyst for CO2 reduction, namely, with a tetraphenylporphyrin ligand and analogues. In particular, we investigated iron(I) tetraphenylporphyrin with one of the meso-phenyl groups substituted with o-urea, p-urea, or o-2-amide groups. These substituents can provide hydrogen-bonding interactions in the second coordination sphere with bound ligands and assist with proton relay. Furthermore, our studies investigated bicarbonate and phenol as stabilizers and proton donors in the reaction mechanism. Potential energy landscapes for double protonation of iron(I) porphyrinate with bound CO2 are reported. The work shows that the bicarbonate bridges the urea/amide groups to the CO2 and iron center and provides a tight bonding pattern with strong hydrogen-bonding interactions that facilitates easy proton delivery and reduction of CO2. Specifically, bicarbonate provides a low-energy proton shuttle mechanism to form CO and water efficiently. Furthermore, the o-urea group locks bicarbonate and CO2 in a tight orientation and helps with ideal proton transfer, while there is more mobility and lesser stability with an o-amide group in that position instead. Our calculations show that the o-urea group leads to reduction in proton-transfer barriers, in line with experimental observation. We then applied electric-field-effect calculations to estimate the environmental effects on the two proton-transfer steps in the reaction. These calculations describe the perturbations that enhance the driving forces for the proton-transfer steps and have been used to make predictions about how the catalysts can be further engineered for more enhanced CO2 reduction processes.

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Towards more effective beryllium chelation: an investigation of second-sphere hydrogen bonding.

Publications

Towards more effective beryllium chelation: an investigation of second-sphere hydrogen bonding.

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