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A transfer learning approach for reaction discovery in small data situations using generative model.

ABSTRACT: Sustainable practices in chemical sciences can be better realized by adopting interdisciplinary approaches that combine the advantages of machine learning (ML) on the initially acquired small data in reaction discovery. Developing new reactions generally remains heuristic and even time and resource intensive. For instance, synthesis of fluorine-containing compounds, which constitute ∼20% of the marketed drugs, relies on deoxyfluorination of abundantly available alcohols. Herein, we demonstrate the use of a recurrent neural network-based deep generative model built on a library of just 37 alcohols for effective learning and exploration of the chemical space. The proof-of-concept ML model is able to generate good quality, synthetically accessible, higher-yielding novel alcohol molecules. This protocol would have superior utility for deployment into a practical reaction discovery pipeline.

SUBMITTER: Singh S

PROVIDER: S-EPMC9272387 | biostudies-literature | 2022 Jul

REPOSITORIES: biostudies-literature

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A transfer learning approach for reaction discovery in small data situations using generative model.

Singh Sukriti S Sunoj Raghavan B RB

iScience 20220622 7

Sustainable practices in chemical sciences can be better realized by adopting interdisciplinary approaches that combine the advantages of machine learning (ML) on the initially acquired small data in reaction discovery. Developing new reactions generally remains heuristic and even time and resource intensive. For instance, synthesis of fluorine-containing compounds, which constitute ∼20% of the marketed drugs, relies on deoxyfluorination of abundantly available alcohols. Herein, we demonstrate t ...[more]

PMID: 35832891

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A transfer learning approach for reaction discovery in small data situations using generative model.

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A transfer learning approach for reaction discovery in small data situations using generative model.

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