Dataset Information

Representation of Leaf-to-Canopy Radiative Transfer Processes Improves Simulation of Far-Red Solar-Induced Chlorophyll Fluorescence in the Community Land Model Version 5.

ABSTRACT: Recent advances in satellite observations of solar-induced chlorophyll fluorescence (SIF) provide a new opportunity to constrain the simulation of terrestrial gross primary productivity (GPP). Accurate representation of the processes driving SIF emission and its radiative transfer to remote sensing sensors is an essential prerequisite for data assimilation. Recently, SIF simulations have been incorporated into several land surface models, but the scaling of SIF from leaf-level to canopy-level is usually not well-represented. Here, we incorporate the simulation of far-red SIF observed at nadir into the Community Land Model version 5 (CLM5). Leaf-level fluorescence yield was simulated by a parametric simplification of the Soil Canopy-Observation of Photosynthesis and Energy fluxes model (SCOPE). And an efficient and accurate method based on escape probability is developed to scale SIF from leaf-level to top-of-canopy while taking clumping and the radiative transfer processes into account. SIF simulated by CLM5 and SCOPE agreed well at sites except one in needleleaf forest (R ² > 0.91, root-mean-square error <0.19 W⋅m^-2⋅sr^-1⋅μm^-1), and captured the day-to-day variation of tower-measured SIF at temperate forest sites (R ² > 0.68). At the global scale, simulated SIF generally captured the spatial and seasonal patterns of satellite-observed SIF. Factors including the fluorescence emission model, clumping, bidirectional effect, and leaf optical properties had considerable impacts on SIF simulation, and the discrepancies between simulate d and observed SIF varied with plant functional type. By improving the representation of radiative transfer for SIF simulation, our model allows better comparisons between simulated and observed SIF toward constraining GPP simulations.

SUBMITTER: Li R

PROVIDER: S-EPMC9285887 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Similar Datasets

Project description:Remote sensing-based measurements of solar-induced chlorophyll fluorescence (SIF) are useful for assessing plant functioning at different spatial and temporal scales. SIF is the most direct measure of photosynthesis and is therefore considered important to advance capacity for the monitoring of gross primary production (GPP) while it has also been suggested that its yield facilitates the early detection of vegetation stress. However, due to the influence of different confounding effects, the apparent SIF signal measured at canopy level differs from the fluorescence emitted at leaf level, which makes its physiological interpretation challenging. One of these effects is the scattering of SIF emitted from leaves on its way through the canopy. The escape fraction ( fesc ) describes the scattering of SIF within the canopy and corresponds to the ratio of apparent SIF at canopy level to SIF at leaf level. In the present study, the fluorescence correction vegetation index (FCVI) was used to determine fesc of far-red SIF for three structurally different crops (sugar beet, winter wheat, and fruit trees) from a diurnal data set recorded by the airborne imaging spectrometer HyPlant. This unique data set, for the first time, allowed a joint analysis of spatial and temporal dynamics of structural effects and thus the downscaling of far-red SIF from canopy ( SIF760canopy ) to leaf level ( SIF760leaf ). For a homogeneous crop such as winter wheat, it seems to be sufficient to determine fesc once a day to reliably scale SIF760 from canopy to leaf level. In contrast, for more complex canopies such as fruit trees, calculating fesc for each observation time throughout the day is strongly recommended. The compensation for structural effects, in combination with normalizing SIF760 to remove the effect of incoming radiation, further allowed the estimation of SIF emission efficiency ( εSIF ) at leaf level, a parameter directly related to the diurnal variations of plant photosynthetic efficiency.

Project description:Canopy leaves are sinks of dry and wet nitrogen (N) deposition, most studies have not considered the response of canopy leaves to the alternating processes of dry and wet N deposition. We manipulated a close top chamber experiment to observe the effects of simulated N deposition with the same total deposition flux but different dry to wet ratios on leaf structure and physiology by spraying NH4Cl solution or supplying gaseous NH3 over the canopy of seedlings of three species (Betula platyphylla, Fraxinus mandshurica, Pinus koraiensis) placed in the chamber. After 32 days of N deposition and relative to the control, the leaf morphology and mesophyll tissue structure of the three species had no significant changes under all N deposition treatments. With the increase in the ratio of dry to wet N deposition, the N concentration, N metabolizing enzyme activity and soluble protein concentration in leaves of all three species increased continuously, but for the leaf light-saturated net photosynthesis rate, B. platyphylla showed a continuous increase, F. mandshurica showed a continuous decrease, and P. koraiensis showed no significant change. We found that F. mandshurica was the only species whose foliar chlorophyll and potassium concentration decreased with the increase in the ratio of dry to wet N deposition and its leaf light-saturated net photosynthesis rate was positively correlated with foliar chlorophyll and potassium concentration, respectively. Our results indicate that dry deposition is relatively more important on leaf physiological functions in alternating deposition. B. platyphylla and P. koraiensis may better acclimate to canopy NH3/NH4 + deposition than F. mandshurica. Most importantly, the results indicate that a single simulated dry and wet deposition would overestimate and underestimate the response of leaf function to atmospheric N deposition, respectively. Alternating processes of dry and wet deposition should be considered for more realistic assessments of the effects of atmospheric N deposition in forests.

Project description:Within-canopy variation in leaf structural and photosynthetic characteristics is a major means by which whole canopy photosynthesis is maximized at given total canopy nitrogen. As key acclimatory modifications, leaf nitrogen content (N A) and photosynthetic capacity (A A) per unit area increase with increasing light availability in the canopy and these increases are associated with increases in leaf dry mass per unit area (M A) and/or nitrogen content per dry mass and/or allocation. However, leaf functional characteristics change with increasing leaf age during leaf development and aging, but the importance of these alterations for within-canopy trait gradients is unknown. I conducted a meta-analysis based on 71 canopies that were sampled at different time periods or, in evergreens, included measurements for different-aged leaves to understand how within-canopy variations in leaf traits (trait plasticity) depend on leaf age. The analysis demonstrated that in evergreen woody species, M A and N A plasticity decreased with increasing leaf age, but the change in A A plasticity was less suggesting a certain re-acclimation of A A to altered light. In deciduous woody species, M A and N A gradients in flush-type species increased during leaf development and were almost invariable through the rest of the season, while in continuously leaf-forming species, the trait gradients increased constantly with increasing leaf age. In forbs, N A plasticity increased, while in grasses, N A plasticity decreased with increasing leaf age, reflecting life form differences in age-dependent changes in light availability and in nitrogen resorption for growth of generative organs. Although more work is needed to improve the coverage of age-dependent plasticity changes in some plant life forms, I argue that the age-dependent variation in trait plasticity uncovered in this study is large enough to warrant incorporation in simulations of canopy photosynthesis through the growing period.

Dataset Information

Representation of Leaf-to-Canopy Radiative Transfer Processes Improves Simulation of Far-Red Solar-Induced Chlorophyll Fluorescence in the Community Land Model Version 5.

Similar Datasets

OmicsDI is part of the ELIXIR infrastructure

Tweets