Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Complete Genome Sequence of the N4-like Pseudomonas aeruginosa Bacteriophage vB_PaeP_CMS1.

ABSTRACT: vB_PaeP_CMS1 is a lytic bacteriophage that infects Pseudomonas aeruginosa. Whole-genome sequencing revealed that vB_PaeP_CMS1 has a linear double-stranded DNA (dsDNA) genome composed of 72,673 bp, with a GC content of 54.9%, that harbors 92 predicted open reading frames, with the greatest genome homology to members of the family Podoviridae, genus Litunavirus.

SUBMITTER: Faith D

PROVIDER: S-EPMC9302080 | biostudies-literature | 2022 Jul

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Complete Genome Sequence of the N4-like Pseudomonas aeruginosa Bacteriophage vB_PaeP_CMS1.

Faith Dominick D Kinnersley Margie M Schwartzkopf Caleb M CM de Mattos Camilla D CD Schmidt Amelia K AK Secor Patrick R PR

Microbiology resource announcements 20220531 7

vB_PaeP_CMS1 is a lytic bacteriophage that infects Pseudomonas aeruginosa. Whole-genome sequencing revealed that vB_PaeP_CMS1 has a linear double-stranded DNA (dsDNA) genome composed of 72,673 bp, with a GC content of 54.9%, that harbors 92 predicted open reading frames, with the greatest genome homology to members of the family <i>Podoviridae</i>, genus <i>Litunavirus</i>. ...[more]

PMID: 35638894

Similar Datasets

Complete Genome Sequence of Pseudomonas aeruginosa Bacteriophage vB_PaeP_PaCe.

Project description:Here, we report the complete genome sequence of the virulent podovirus PaCe, which was isolated from wastewater in San Diego, California, using the host Pseudomonas aeruginosa. Its complete genome is 45,365 bp in length, with a GC content of 52.5%. PaCe belongs to the genus Bruynoghevirus in the class Caudoviricetes.

| S-EPMC9387253 | biostudies-literature

Complete Genome Sequence of the Pseudomonas aeruginosa Bacteriophage phiIBB-PAA2.

Project description:Pseudomonas aeruginosa phage phiIBB-PAA2 is a broad-host-range virus isolated from raw hospital sewage (Porto, Portugal). This phage has a terminally redundant (183 bp), 45,344-bp double-stranded DNA (dsDNA) genome encoding 66 coding sequences (CDSs) and 3 tRNAs. It belongs to the family Podoviridae and the genus Luz24likevirus.

| S-EPMC3916486 | biostudies-literature

Complete genome sequence of Pseudomonas aeruginosa lytic bacteriophage PA1O which resembles temperate bacteriophage D3112.

Project description:A novel Pseudomonas aeruginosa lytic bacteriophage (phage), PA1Ø, was isolated, and its genome was sequenced completely. This phage is able to lyse not only P. aeruginosa but also Staphylococcus aureus. Genome analysis of PA1Ø showed that it is similar to a P. aeruginosa temperate phage, D3112, with the exception of the absence of a c repressor-encoding gene, which is known to play a critical role in the maintenance of the lysogenic state of D3112 in P. aeruginosa.

| S-EPMC3302327 | biostudies-literature

Complete genome sequence of Pseudomonas aeruginosa lytic bacteriophage PA1O which resembles temperate bacteriophage D3112.

| S-EPMC3302327 | biostudies-literature

Complete genome sequence of IME11, a new N4-like bacteriophage.

Project description:N4-like bacteriophages are a class of virulent Podoviridae phages for which few genome sequences are present in GenBank. IME11, a novel lytic Escherichia bacteriophage with a wide host range, was isolated, and the whole genome was sequenced. It has a circular double-stranded DNA genome of 72,570 bp. Genomic analysis showed that it resembles another Escherichia phage, vB_EcoP_G7C. Here we announce its complete genome and major findings from its annotation.

| S-EPMC3503130 | biostudies-literature

Complete Genome Sequence of Pseudomonas aeruginosa Bacteriophage PASA16, Used in Multiple Phage Therapy Treatments Globally.

Project description:PASA16 is a Pseudomonas aeruginosa phage isolated from a soil sample and used to treat several patients suffering from persistent infections in various countries. PASA16's genome was sequenced, analyzed, and deposited in GenBank.

| S-EPMC9022550 | biostudies-literature

Complete Genome Sequence of the Lysogenic Pseudomonas Bacteriophage Fyn8.

Project description:A temperate bacteriophage infecting Pseudomonas aeruginosa PAO1 was isolated from river water. Nanopore sequencing revealed that it has a circular double-stranded DNA genome of 45,617 bp, containing typical phage structural proteins and lambda-like lysogeny regulators. Putative O-antigen serotype conversion and anti-cyclic oligonucleotide-based antiphage signaling system (CBASS) defense system proteins were also identified.

| S-EPMC10019297 | biostudies-literature

Complete genome sequence of Pseudomonas aeruginosa siphophage MP1412.

Project description:We report the complete genome sequence of Pseudomonas aeruginosa siphophage MP1412, which displays synteny to those of P. aeruginosa phages M6 and YuA. However, the presence of two homing endonucleases of the GIY-YIG family is unique to MP1412, suggesting their unique role in the phage life cycle of the bacterial host.

| S-EPMC3416161 | biostudies-literature

Complete Genome Sequence of Pseudomonas aeruginosa Phage vB_PaeM_CEB_DP1.

Project description:vB_PaeM_CEB_DP1 is a Pseudomonas aeruginosa bacteriophage (phage) belonging to the Pbunalikevirus genus of the Myoviridae family of phages. It was isolated from hospital sewage. vB_PaeM_CEB_DP1 is a double-stranded DNA (dsDNA) phage, with a genome of 66,158 bp, containing 89 predicted open reading frames.

| S-EPMC4582565 | biostudies-literature

Complete Genome Sequence of the Pseudomonas fluorescens Bacteriophage UFV-P2.

Project description:Milk proteolysis caused by Pseudomonas fluorescens is a serious problem in the dairy industries as a result of its ability to grow under refrigeration. The use of phages to control contaminants in food has been considered an alternative to traditional methods; therefore, a thorough understanding of such organisms is vital for their use. In this study, we show the complete genome sequence and analysis of a P. fluorescens phage isolated from wastewater of a dairy industry in Brazil.

| S-EPMC3569311 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data