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Cartesian coordinates scaffold stable spatial perception over time.

ABSTRACT: Visual systems exploit temporal continuity principles to achieve stable spatial perception, manifested as the serial dependence and central tendency effects. These effects are posited to reflect a smoothing process whereby past and present information integrates over time to decrease noise and stabilize perception. Meanwhile, the basic spatial coordinate-Cartesian versus polar-that scaffolds the integration process in two-dimensional continuous space remains unknown. The spatial coordinates are largely related to the allocentric and egocentric reference frames and presumably correspond with early and late processing stages in spatial perception. Here, four experiments consistently demonstrate that Cartesian outperforms polar coordinates in characterizing the serial bias-serial dependence and central tendency effect-in two-dimensional continuous spatial perception. The superiority of Cartesian coordinates is robust, independent of task environment (online and offline task), experimental length (short and long blocks), spatial context (shape of visual mask), and response modality (keyboard and mouse). Taken together, the visual system relies on the Cartesian coordinates for spatiotemporal integration to facilitate stable representation of external information, supporting the involvement of allocentric reference frame and top-down modulation in spatial perception over long time intervals.

SUBMITTER: Luo M

PROVIDER: S-EPMC9315070 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:BackgroundDiagnosis of infectious diseases now benefits from advancing technology to perform multiplex analysis of a growing number of variables. These advances enable simultaneous surveillance of markers characterizing species and strain complexity, mutations associated with drug susceptibility, and antigen-based polymorphisms in relation to evaluation of vaccine effectiveness. We have recently developed assays detecting single nucleotide polymorphisms (SNPs) in the P. falciparum genome that take advantage of post-PCR ligation detection reaction and fluorescent microsphere labeling strategies. Data from these assays produce a spectrum of outcomes showing that infections result from single to multiple strains. Traditional methods for distinguishing true positive signal from background can cause false positive diagnoses leading to incorrect interpretation of outcomes associated with disease treatment.ResultsFollowing analysis of Plasmodium falciparum dihydrofolate reductase SNPs associated with resistance to a commonly used antimalarial drug, Fansidar (Sulfadoxine/pyrimethamine), and presumably neutral SNPs for parasite strain differentiation, we first evaluated our data after setting a background signal based on the mean plus three standard deviations for known negative control samples. Our analysis of single allelic controls suggested that background for the absent allele increased as the concentration of the target allele increased. To address this problem, we introduced a simple change of variables from customary (X,Y) (Cartesian) coordinates to planar polar coordinates (X = rcos(theta), Y = rsin(theta)). Classification of multidimensional fluorescence signals based on histograms of angular and radial data distributions proved more effective than classification based on Cartesian thresholds. Comparison with known diallelic dilution controls suggests that histogram-based classification is effective for major:minor allele concentration ratios as high as 10:1.ConclusionWe have observed that the diallelic SNP data resulting from analysis of P. falciparum mutations is more accurately diagnosed when a simple polar transform of the (X,Y) data into (r,theta) is used. The development of high through-put methods for genotyping P. falciparum SNPs and the refinement of analytical approaches for evaluating these molecular diagnostic results significantly advance the evaluation of parasite population diversity and antimalarial drug resistance.

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Cartesian coordinates scaffold stable spatial perception over time.

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