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Same performance of exome sequencing before and after fetal autopsy for congenital abnormalities: toward a paradigm shift in prenatal diagnosis?


ABSTRACT: Prenatal exome sequencing could be complex because of limited phenotypical data compared to postnatal/portmortem phenotype in fetuses affected by multiple congenital abnormalities (MCA). Here, we investigated limits of prenatal phenotype for ES interpretation thanks to a blindly reanalysis of postmortem ES data using prenatal data only in fetuses affected by MCA and harboring a (likely)pathogenic variant or a variant of unknown significance (VUS). Prenatal ES identified all causative variant previously reported by postmortem ES (22/24 (92%) and 2/24 (8%) using solo-ES and trio-ES respectively). Prenatal ES identified 5 VUS (in four fetuses). Two of them have been previously reported by postmortem ES. Prenatal ES were negative for four fetuses for which a VUS were diagnosed after autopsy. Our study suggests that prenatal phenotype is not a limitation for implementing pES in the prenatal assessment of unsolved MCA to personalize fetal medicine and could influence indication of postmortem examination.

SUBMITTER: Bourgon N 

PROVIDER: S-EPMC9349205 | biostudies-literature | 2022 Aug

REPOSITORIES: biostudies-literature

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Same performance of exome sequencing before and after fetal autopsy for congenital abnormalities: toward a paradigm shift in prenatal diagnosis?

Bourgon Nicolas N   Garde Aurore A   Bruel Ange-Line AL   Lefebvre Mathilde M   Mau-Them Frederic Tran FT   Moutton Sebastien S   Sorlin Arthur A   Nambot Sophie S   Delanne Julian J   Chevarin Martin M   Pöe Charlotte C   Thevenon Julien J   Lehalle Daphné D   Jean-Marçais Nolween N   Kuentz Paul P   Lambert Laetitia L   El Chehadeh Salima S   Schaefer Elise E   Willems Marjolaine M   Laffargue Fanny F   Francannet Christine C   Fradin Mélanie M   Gaillard Dominique D   Blesson Sophie S   Goldenberg Alice A   Capri Yline Y   Sagot Paul P   Rousseau Thierry T   Simon Emmanuel E   Binquet Christine C   Ascencio Marie-Laure ML   Duffourd Yannis Y   Philippe Christophe C   Faivre Laurence L   Vitobello Antonio A   Thauvin-Robinet Christel C  

European journal of human genetics : EJHG 20220516 8


Prenatal exome sequencing could be complex because of limited phenotypical data compared to postnatal/portmortem phenotype in fetuses affected by multiple congenital abnormalities (MCA). Here, we investigated limits of prenatal phenotype for ES interpretation thanks to a blindly reanalysis of postmortem ES data using prenatal data only in fetuses affected by MCA and harboring a (likely)pathogenic variant or a variant of unknown significance (VUS). Prenatal ES identified all causative variant pre  ...[more]

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