ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy.
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ABSTRACT:
SUBMITTER: Tangaro MA
PROVIDER: S-EPMC9502156 | biostudies-literature | 2021 Nov
REPOSITORIES: biostudies-literature
Publications
ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy.
Tangaro Marco A MA Defazio Giuseppe G Fosso Bruno B Licciulli Vito Flavio VF Grillo Giorgio G Donvito Giacinto G Lavezzo Enrico E Baruzzo Giacomo G Pesole Graziano G Santamaria Monica M
Bioinformatics (Oxford, England) 20211101 22
<h4>Summary</h4>ITSoneWB (ITSone WorkBench) is a Galaxy-based bioinformatic environment where comprehensive and high-quality reference data are connected with established pipelines and new tools in an automated and easy-to-use service targeted at global taxonomic analysis of eukaryotic communities based on Internal Transcribed Spacer 1 variants high-throughput sequencing.<h4>Availability and implementation</h4>ITSoneWB has been deployed on the INFN-Bari ReCaS cloud facility and is freely availab ...[more]
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