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Putting on molecular weight: Enabling cryo-EM structure determination of sub-100-kDa proteins.


ABSTRACT: Significant advances in the past decade have enabled high-resolution structure determination of a vast variety of proteins by cryogenic electron microscopy single particle analysis. Despite improved sample preparation, next-generation imaging hardware, and advanced single particle analysis algorithms, small proteins remain elusive for reconstruction due to low signal-to-noise and lack of distinctive structural features. Multiple efforts have therefore been directed at the development of size-increase techniques for small proteins. Here we review the latest methods for increasing effective molecular weight of proteins <100 ​kDa through target protein binding or target protein fusion - specifically by using nanobody-based assemblies, fusion tags, and symmetric scaffolds. Finally, we summarize these state-of-the-art techniques into a decision-tree to facilitate the design of tailored future approaches, and thus for further exploration of ever-smaller proteins that make up the largest part of the human genome.

SUBMITTER: Wentinck K 

PROVIDER: S-EPMC9562432 | biostudies-literature | 2022

REPOSITORIES: biostudies-literature

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Putting on molecular weight: Enabling cryo-EM structure determination of sub-100-kDa proteins.

Wentinck Koen K   Gogou Christos C   Meijer Dimphna H DH  

Current research in structural biology 20221002


Significant advances in the past decade have enabled high-resolution structure determination of a vast variety of proteins by cryogenic electron microscopy single particle analysis. Despite improved sample preparation, next-generation imaging hardware, and advanced single particle analysis algorithms, small proteins remain elusive for reconstruction due to low signal-to-noise and lack of distinctive structural features. Multiple efforts have therefore been directed at the development of size-inc  ...[more]

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