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Non-viral precision T cell receptor replacement for personalized cell therapy.


ABSTRACT: T cell receptors (TCRs) enable T cells to specifically recognize mutations in cancer cells1-3. Here we developed a clinical-grade approach based on CRISPR-Cas9 non-viral precision genome-editing to simultaneously knockout the two endogenous TCR genes TRAC (which encodes TCRα) and TRBC (which encodes TCRβ). We also inserted into the TRAC locus two chains of a neoantigen-specific TCR (neoTCR) isolated from circulating T cells of patients. The neoTCRs were isolated using a personalized library of soluble predicted neoantigen-HLA capture reagents. Sixteen patients with different refractory solid cancers received up to three distinct neoTCR transgenic cell products. Each product expressed a patient-specific neoTCR and was administered in a cell-dose-escalation, first-in-human phase I clinical trial ( NCT03970382 ). One patient had grade 1 cytokine release syndrome and one patient had grade 3 encephalitis. All participants had the expected side effects from the lymphodepleting chemotherapy. Five patients had stable disease and the other eleven had disease progression as the best response on the therapy. neoTCR transgenic T cells were detected in tumour biopsy samples after infusion at frequencies higher than the native TCRs before infusion. This study demonstrates the feasibility of isolating and cloning multiple TCRs that recognize mutational neoantigens. Moreover, simultaneous knockout of the endogenous TCR and knock-in of neoTCRs using single-step, non-viral precision genome-editing are achieved. The manufacture of neoTCR engineered T cells at clinical grade, the safety of infusing up to three gene-edited neoTCR T cell products and the ability of the transgenic T cells to traffic to the tumours of patients are also demonstrated.

SUBMITTER: Foy SP 

PROVIDER: S-EPMC9768791 | biostudies-literature | 2023 Mar

REPOSITORIES: biostudies-literature

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Non-viral precision T cell receptor replacement for personalized cell therapy.

Foy Susan P SP   Jacoby Kyle K   Bota Daniela A DA   Hunter Theresa T   Pan Zheng Z   Stawiski Eric E   Ma Yan Y   Lu William W   Peng Songming S   Wang Clifford L CL   Yuen Benjamin B   Dalmas Olivier O   Heeringa Katharine K   Sennino Barbara B   Conroy Andy A   Bethune Michael T MT   Mende Ines I   White William W   Kukreja Monica M   Gunturu Swetha S   Humphrey Emily E   Hussaini Adeel A   An Duo D   Litterman Adam J AJ   Quach Boi Bryant BB   Ng Alphonsus H C AHC   Lu Yue Y   Smith Chad C   Campbell Katie M KM   Anaya Daniel D   Skrdlant Lindsey L   Huang Eva Yi-Hsuan EY   Mendoza Ventura V   Mathur Jyoti J   Dengler Luke L   Purandare Bhamini B   Moot Robert R   Yi Michael C MC   Funke Roel R   Sibley Alison A   Stallings-Schmitt Todd T   Oh David Y DY   Chmielowski Bartosz B   Abedi Mehrdad M   Yuan Yuan Y   Sosman Jeffrey A JA   Lee Sylvia M SM   Schoenfeld Adam J AJ   Baltimore David D   Heath James R JR   Franzusoff Alex A   Ribas Antoni A   Rao Arati V AV   Mandl Stefanie J SJ  

Nature 20221110 7953


T cell receptors (TCRs) enable T cells to specifically recognize mutations in cancer cells<sup>1-3</sup>. Here we developed a clinical-grade approach based on CRISPR-Cas9 non-viral precision genome-editing to simultaneously knockout the two endogenous TCR genes TRAC (which encodes TCRα) and TRBC (which encodes TCRβ). We also inserted into the TRAC locus two chains of a neoantigen-specific TCR (neoTCR) isolated from circulating T cells of patients. The neoTCRs were isolated using a personalized l  ...[more]

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