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Internal checkpoint regulates T cell neoantigen reactivity and susceptibility to PD1 blockade.


ABSTRACT:

Background

Adoptive transfer of tumor-infiltrating lymphocytes (TIL) fails to consistently elicit tumor rejection. Manipulation of intrinsic factors that inhibit T cell effector function and neoantigen recognition may therefore improve TIL therapy outcomes. We previously identified the cytokine-induced SH2 protein (CISH) as a key regulator of T cell functional avidity in mice. Here, we investigate the mechanistic role of CISH in regulating human T cell effector function in solid tumors and demonstrate that CRISPR/Cas9 disruption of CISH enhances TIL neoantigen recognition and response to checkpoint blockade.

Methods

Single-cell gene expression profiling was used to identify a negative correlation between high CISH expression and TIL activation in patient-derived TIL. A GMP-compliant CRISPR/Cas9 gene editing process was developed to assess the impact of CISH disruption on the molecular and functional phenotype of human peripheral blood T cells and TIL. Tumor-specific T cells with disrupted Cish function were adoptively transferred into tumor-bearing mice and evaluated for efficacy with or without checkpoint blockade.

Findings

CISH expression was associated with T cell dysfunction. CISH deletion using CRISPR/Cas9 resulted in hyper-activation and improved functional avidity against tumor-derived neoantigens without perturbing T cell maturation. Cish knockout resulted in increased susceptibility to checkpoint blockade in vivo.

Conclusions

CISH negatively regulates human T cell effector function, and its genetic disruption offers a novel avenue to improve the therapeutic efficacy of adoptive TIL therapy.

Funding

This study was funded by Intima Bioscience, U.S. and in part through the Intramural program CCR at the National Cancer Institute.

SUBMITTER: Palmer DC 

PROVIDER: S-EPMC9847506 | biostudies-literature | 2022 Oct

REPOSITORIES: biostudies-literature

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Publications

Internal checkpoint regulates T cell neoantigen reactivity and susceptibility to PD1 blockade.

Palmer Douglas C DC   Webber Beau R BR   Patel Yogin Y   Johnson Matthew J MJ   Kariya Christine M CM   Lahr Walker S WS   Parkhurst Maria R MR   Gartner Jared J JJ   Prickett Todd D TD   Lowery Frank J FJ   Kishton Rigel J RJ   Gurusamy Devikala D   Franco Zulmarie Z   Vodnala Suman K SK   Diers Miechaleen D MD   Wolf Natalie K NK   Slipek Nicholas J NJ   McKenna David H DH   Sumstad Darin D   Viney Lydia L   Henley Tom T   Bürckstümmer Tilmann T   Baker Oliver O   Hu Ying Y   Yan Chunhua C   Meerzaman Daoud D   Padhan Kartik K   Lo Winnie W   Malekzadeh Parisa P   Jia Li L   Deniger Drew C DC   Patel Shashank J SJ   Robbins Paul F PF   McIvor R Scott RS   Choudhry Modassir M   Rosenberg Steven A SA   Moriarity Branden S BS   Restifo Nicholas P NP  

Med (New York, N.Y.) 20220824 10


<h4>Background</h4>Adoptive transfer of tumor-infiltrating lymphocytes (TIL) fails to consistently elicit tumor rejection. Manipulation of intrinsic factors that inhibit T cell effector function and neoantigen recognition may therefore improve TIL therapy outcomes. We previously identified the cytokine-induced SH2 protein (CISH) as a key regulator of T cell functional avidity in mice. Here, we investigate the mechanistic role of CISH in regulating human T cell effector function in solid tumors a  ...[more]

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