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SCOR: a Structural Classification of RNA database.


ABSTRACT: The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tertiary interactions found in the larger RNA structures is also included along with examples. The SCOR database is accessible at http://scor.lbl.gov.

SUBMITTER: Klosterman PS 

PROVIDER: S-EPMC99131 | biostudies-literature | 2002 Jan

REPOSITORIES: biostudies-literature

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SCOR: a Structural Classification of RNA database.

Klosterman Peter S PS   Tamura Makio M   Holbrook Stephen R SR   Brenner Steven E SE  

Nucleic acids research 20020101 1


The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tert  ...[more]

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