Functional Transcription Factor Target Networks Illuminate Control of Epithelial Remodelling
Ontology highlight
ABSTRACT: The data provided relate to the development and benchmarking of the DroFN functional gene network and the NetNC algorithm, described in the paper associated with this record - https://www.mdpi.com/2072-6694/12/10/2823 The NetNC software is available on GitHub (https://github.com/overton-group/NetNC). The files available for download are summarised below:
DroFN.zip - DroFN network and gold standard data (TEST-NET, TRAIN-NET) for network inference and benchmarking.
HCPIN_compare.zip - HCPIN input, output and performance summary files on TEST-CL_ALL
MCL_compare.zip - Preliminary training and testing data for comparison of NetNC against the MCL algorithm
NetNC_TEST.zip - TEST-CL_ALL dataset used for NetNC benchmarking
NetNC_TRAIN.zip - TRAIN-CL_ALL dataset used for NetNC development
Please cite: Overton et al. (2020) 'Functional Transcription Factor Target Networks Illuminate Control of Epithelial Remodelling' Cancers 12, 2823
ORGANISM(S): Drosophila melanogaster (fruit fly)
SUBMITTER: Ian Overton
PROVIDER: S-BSST460 | biostudies-other |
REPOSITORIES: biostudies-other
ACCESS DATA