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The environmental fate of organic pollutants through the global microbial metabolism.

ABSTRACT: The production of new chemicals for industrial or therapeutic applications exceeds our ability to generate experimental data on their biological fate once they are released into the environment. Typically, mixtures of organic pollutants are freed into a variety of sites inhabited by diverse microorganisms, which structure complex multispecies metabolic networks. A machine learning approach has been instrumental to expose a correlation between the frequency of 149 atomic triads (chemotopes) common in organo-chemical compounds and the global capacity of microorganisms to metabolise them. Depending on the type of environmental fate defined, the system can correctly predict the biodegradative outcome for 73-87% of compounds. This system is available to the community as a web server (http://www.pdg.cnb.uam.es/BDPSERVER). The application of this predictive tool to chemical species released into the environment provides an early instrument for tentatively classifying the compounds as biodegradable or recalcitrant. Automated surveys of lists of industrial chemicals currently employed in large quantities revealed that herbicides are the group of functional molecules more difficult to recycle into the biosphere through the inclusive microbial metabolism.

SUBMITTER: Gomez MJ

PROVIDER: S-EPMC1911198 | biostudies-other | 2007

REPOSITORIES: biostudies-other

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The environmental fate of organic pollutants through the global microbial metabolism.

Gómez Manuel J MJ Pazos Florencio F Guijarro Francisco J FJ de Lorenzo Víctor V Valencia Alfonso A

Molecular systems biology 20070605

The production of new chemicals for industrial or therapeutic applications exceeds our ability to generate experimental data on their biological fate once they are released into the environment. Typically, mixtures of organic pollutants are freed into a variety of sites inhabited by diverse microorganisms, which structure complex multispecies metabolic networks. A machine learning approach has been instrumental to expose a correlation between the frequency of 149 atomic triads (chemotopes) commo ...[more]

PMID: 17551509

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Project description:The distribution and fractionation of persistent organic pollutants (POPs) in different matrices refer to how these pollutants are dispersed and separated within various environmental compartments. This is a significant study area as it helps us understand the transport efficiencies and long-range transport potentials of POPs to enter remote areas, particularly polar regions. This study provides a comprehensive review of the progress in understanding the distribution and fractionation of POPs. We focus on the contributions of four intermedia processes (dry and wet depositions for gaseous and particulate POPs) and determine their transfer between air and soil. These processes are controlled by their partitioning between gaseous and particulate phases in the atmosphere. The distribution patterns and fractionations can be categorized into primary and secondary types. Equations are developed to quantificationally study the primary and secondary distributions and fractionations of POPs. The analysis results suggest that the transfer of low molecular weight (LMW) POPs from air to soil is mainly through gas diffusion and particle deposition, whereas high molecular weight (HMW) POPs are mainly via particle deposition. HMW-POPs tend to be trapped near the source, whereas LMW-POPs are more prone to undergo long-range atmospheric transport. This crucial distinction elucidates the primary reason behind their temperature-independent primary fractionation. However, the secondary distribution and fractionation can only be observed along a temperature gradient, such as latitudinal or altitudinal transects. An animation is produced by a one-dimensional transport model to simulate conceptively the transport of CB-28 and CB-180, revealing the similarities and differences between the primary and secondary distributions and fractionations. We suggest that the decreasing temperature trend along latitudes is not the major reason for POPs to be fractionated into the polar ecosystems, but drives the longer-term accumulation of POPs in cold climates or polar cold trapping.

Dataset Information

The environmental fate of organic pollutants through the global microbial metabolism.

Publications

The environmental fate of organic pollutants through the global microbial metabolism.

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