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Rhinosporidium seeberi: a human pathogen from a novel group of aquatic protistan parasites.

ABSTRACT: Rhinosporidium seeberi, a microorganism that can infect the mucosal surfaces of humans and animals, has been classified as a fungus on the basis of morphologic and histochemical characteristics. Using consensus polymerase chain reaction (PCR), we amplified a portion of the R. seeberi 18S rRNA gene directly from infected tissue. Analysis of the aligned sequence and inference of phylogenetic relationships showed that R. seeberi is a protist from a novel clade of parasites that infect fish and amphibians. Fluorescence in situ hybridization and R. seeberi- specific PCR showed that this unique 18S rRNA sequence is also present in other tissues infected with R. seeberi. Our data support the R. seeberi phylogeny recently suggested by another group. R. seeberi is not a classic fungus, but rather the first known human pathogen from the DRIPs clade, a novel clade of aquatic protistan parasites (Ichthyosporea).

SUBMITTER: Fredricks DN

PROVIDER: S-EPMC2640875 | biostudies-other | 2000 May-Jun

REPOSITORIES: biostudies-other

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Rhinosporidium seeberi: a human pathogen from a novel group of aquatic protistan parasites.

Fredricks D N DN Jolley J A JA Lepp P W PW Kosek J C JC Relman D A DA

Emerging infectious diseases 20000501 3

Rhinosporidium seeberi, a microorganism that can infect the mucosal surfaces of humans and animals, has been classified as a fungus on the basis of morphologic and histochemical characteristics. Using consensus polymerase chain reaction (PCR), we amplified a portion of the R. seeberi 18S rRNA gene directly from infected tissue. Analysis of the aligned sequence and inference of phylogenetic relationships showed that R. seeberi is a protist from a novel clade of parasites that infect fish and amph ...[more]

PMID: 10827117

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Project description:By infecting multiple host species and acting as a food resource, parasites can affect food web topography and contribute to ecosystem energy transfer. Owing to the remarkable secondary production of some taxa, parasite biomass - although cryptic - can be comparable to other invertebrate and vertebrate groups. More resolved estimates of parasite biomass are therefore needed to understand parasite interactions, their consequences for host fitness, and potential influences on ecosystem energetics. We developed an approach to quantify the masses of helminth parasites and compared our results with those of biovolume-based approaches. Specifically, we massed larval and adult parasites representing 13 species and five life stages of trematodes and cestodes from snail and amphibian hosts. We used a replicated regression approach to quantify dry mass and compared these values with indirect biovolume estimates to test the validity of density assumptions. Our technique provided precise estimates (R (2) from 0.69 to 0.98) of biomass across a wide range of parasite morphotypes and sizes. Individual parasites ranged in mass from 0.368 ± 0.041 to 320 ± 98.1 μg. Among trematodes, adult parasites tended to be the largest followed by rediae, with nonclonal larval stages (metacercariae and cercariae) as the smallest. Among similar morphotypes, direct estimates of dry mass and the traditional biovolume technique provided generally comparable estimates (although important exceptions also emerged). Finally, we present generalized length-mass regression equations to calculate trematode mass from length measurements, and discuss the most efficient use of limited numbers of parasites. By providing a novel method of directly estimating parasite biomass while also helping to validate more traditional methods involving length-mass conversion, our findings aim to facilitate future investigations into the ecological significance of parasites, particularly with respect to ecosystem energetics. In addition, this novel technique can be applied to a wide range of difficult-to-mass organisms.

Project description:Bacteriophages play critical roles in impacting microbial community succession both ecologically and evolutionarily. Although the majority of phage genetic diversity has been increasingly unveiled, phages infecting members of the ecologically important genus Alteromonas remain poorly understood. Here, we present a comprehensive analysis of a newly isolated alterophage, vB_AcoS-R7M (R7M), to characterize its life cycle traits, genomic features, and putative evolutionary origin. R7M harbors abundant genes identified as host-like auxiliary metabolic genes facilitating viral propagation. Genomic analysis suggested that R7M is distinct from currently known alterophages. Interestingly, R7M was found to share a set of similar characteristics with a number of siphophages infecting diverse aquatic opportunistic copiotrophs. We therefore proposed the creation of one new subfamily (Queuovirinae) to group with these evolutionarily related phages. Notably, tail genes were less likely to be shared among them, and baseplate-related genes varied the most. In-depth analyses indicated that R7M has replaced its distal tail with a Rhodobacter capsulatus gene transfer agent (RcGTA)-like baseplate and further acquired a putative receptor interaction site targeting Alteromonas. These findings suggest that horizontal exchanges of viral tail adsorption apparatuses are widespread and vital for phages to hunt new hosts and to adapt to new niches. IMPORTANCE The evolution and ecology of phages infecting members of Alteromonas, a marine opportunistic genus that is widely distributed and of great ecological significance, remain poorly understood. The present study integrates physiological and genomic evidence to characterize the properties and putative phage-host interactions of a newly isolated Alteromonas phage, vB_AcoS-R7M (R7M). A taxonomic study reveals close evolutionary relationships among R7M and a number of siphophages infecting various aquatic copiotrophs. Their similar head morphology and overall genetic framework suggest their putative common ancestry and the grouping of a new viral subfamily. However, their major difference lies in the viral tail adsorption apparatuses and the horizontal exchanges of which possibly account for variations in host specificity. These findings outline an evolutionary scenario for the emergence of diverse viral lineages of a shared genetic pool and give insights into the genetics and ecology of viral host jumps.

Dataset Information

Rhinosporidium seeberi: a human pathogen from a novel group of aquatic protistan parasites.

Publications

Rhinosporidium seeberi: a human pathogen from a novel group of aquatic protistan parasites.

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