Unknown

Dataset Information

0

Ribosomal protein L7/L12 has a helix-turn-helix motif similar to that found in DNA-binding regulatory proteins.


ABSTRACT: Inspection of the structure of the C-terminal domain of ribosomal protein L7/L12 (1) reveals a helix-turn-helix motif similar to the one found in many DNA-binding regulatory proteins (2-5). The 19 alpha-carbon atoms of the L7/L12 alpha-helices superimpose on the DNA binding helices of CAP and cro with root-mean-square distances between corresponding alpha carbons of 1.45 and 1.55 A, respectively. These helices in L7/L12 are within a patch of highly conserved residues on the surface of L7/L12 whose role is as yet uncertain. We raise the possibility that they may constitute a binding site for nucleic acids, most probably RNA. Consistent with this hypothesis are calculations of the electrostatic charge potential surrounding the protein, which show a region of positive potential centered on the first of these helices.

SUBMITTER: Rice PA 

PROVIDER: S-EPMC317856 | biostudies-other | 1989 May

REPOSITORIES: biostudies-other

altmetric image

Publications

Ribosomal protein L7/L12 has a helix-turn-helix motif similar to that found in DNA-binding regulatory proteins.

Rice P A PA   Steitz T A TA  

Nucleic acids research 19890501 10


Inspection of the structure of the C-terminal domain of ribosomal protein L7/L12 (1) reveals a helix-turn-helix motif similar to the one found in many DNA-binding regulatory proteins (2-5). The 19 alpha-carbon atoms of the L7/L12 alpha-helices superimpose on the DNA binding helices of CAP and cro with root-mean-square distances between corresponding alpha carbons of 1.45 and 1.55 A, respectively. These helices in L7/L12 are within a patch of highly conserved residues on the surface of L7/L12 who  ...[more]

Similar Datasets

| S-EPMC1186266 | biostudies-other
| S-EPMC6554028 | biostudies-literature
| S-EPMC3997475 | biostudies-literature
| S-EPMC1143578 | biostudies-literature
| S-EPMC3064346 | biostudies-literature
| S-EPMC8804933 | biostudies-literature
| S-EPMC2772195 | biostudies-literature
| S-EPMC4737164 | biostudies-literature
| S-EPMC2667757 | biostudies-literature
| S-EPMC8279559 | biostudies-literature