Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Energy dispersive XAFS: characterization of electronically excited states of copper(I) complexes.

ABSTRACT: Energy dispersive X-ray absorption spectroscopy (ED-XAS), in which the whole XAS spectrum is acquired simultaneously, has been applied to reduce the real-time for acquisition of spectra of photoinduced excited states by using a germanium microstrip detector gated around one X-ray bunch of the ESRF (100 ps). Cu K-edge XAS was used to investigate the MLCT states of [Cu(dmp)2](+) (dmp =2,9-dimethyl-1,10-phenanthroline) and [Cu(dbtmp)2](+) (dbtmp =2,9-di-n-butyl-3,4,7,8-tetramethyl-1,10-phenanthroline) with the excited states created by excitation at 450 nm (10 Hz). The decay of the longer lived complex with bulky ligands, was monitored for up to 100 ns. DFT calculations of the longer lived MLCT excited state of [Cu(dbp)2](+) (dbp =2,9-di-n-butyl-1,10-phenanthroline) with the bulkier diimine ligands, indicated that the excited state behaves as a Jahn-Teller distorted Cu(II) site, with the interligand dihedral angle changing from 83 to 60° as the tetrahedral coordination geometry flattens and a reduction in the Cu-N distance of 0.03 Å.

SUBMITTER: Tromp M

PROVIDER: S-EPMC3748449 | biostudies-other | 2013 Jun

REPOSITORIES: biostudies-other

ACCESS DATA

Json Xml

Similar Datasets

Benchmarks for Electronically Excited States with CASSCF Methods.

Project description:The accuracy of three different complete active space (CAS) self-consistent field (CASSCF) methods is investigated for the electronically excited-state benchmark set of Schreiber , M. ; et al. J. Chem. Phys. 2008 , 128 , 134110 . Comparison of the CASSCF linear response (LR) methods MC-RPA and MC-TDA and the state-averaged (SA) CASSCF method is made for 122 singlet excitation energies and 69 oscillator strengths. Of all CASSCF methods, when considering the complete test set, MC-RPA performs best for both excitation energies and oscillator strengths with a mean absolute error (MAE) of 0.74 eV and 51%, respectively. MC-TDA and SA-CASSCF show a similar accuracy for the excitation energies with a MAE of ∼1 eV with respect to more accurate coupled cluster (CC3) excitation energies. The opposite trend is observed for the subset of n → π* excitation energies for which SA-CASSCF exhibits the least deviations (MAE 0.65 eV). By looking at s-tetrazine in more detail, we conclude that better performance for the n → π* SA-CASSCF excitation energies can be attributed to a fortunate error compensation. For oscillator strengths, SA-CASSCF performs worst for the complete test set (MAE 100%) as well as for the subsets of n → π* (MAE 192%) and π → π* excitations (MAE 84.9%). In general, CASSCF gives the worst performance for excitation energies of all excited-state ab initio methods considered so far due to lacking the major part of dynamic electron correlation, though MC-RPA and TD-DFT (BP86) show similar performance. Among all LR-type methods, LR-CASSCF oscillator strengths are the ones with the least accuracy for the same reason. As state-specific orbital relaxation effects are accounted for in LR-CASSCF, oscillator strengths are significantly more accurate than those of MS-CASPT2. Our findings should encourage further developments of response theory-based multireference methods with higher accuracy and feasibility.

| S-EPMC6620717 | biostudies-literature

Photosensitized, energy transfer-mediated organometallic catalysis through electronically excited nickel(II).

Project description:Transition metal catalysis has traditionally relied on organometallic complexes that can cycle through a series of ground-state oxidation levels to achieve a series of discrete yet fundamental fragment-coupling steps. The viability of excited-state organometallic catalysis via direct photoexcitation has been demonstrated. Although the utility of triplet sensitization by energy transfer has long been known as a powerful activation mode in organic photochemistry, it is surprising to recognize that photosensitization mechanisms to access excited-state organometallic catalysts have lagged far behind. Here, we demonstrate excited-state organometallic catalysis via such an activation pathway: Energy transfer from an iridium sensitizer produces an excited-state nickel complex that couples aryl halides with carboxylic acids. Detailed mechanistic studies confirm the role of photosensitization via energy transfer.

| S-EPMC5664923 | biostudies-literature

Selective manipulation of electronically excited states through strong light-matter interactions.

Project description:Strong coupling between light and matter leads to the spontaneous formation of hybrid light-matter states, having different energies than the uncoupled states. This opens up for new ways of modifying the energy landscape of molecules without changing their atoms or structure. Heavy metal-free organic light emitting diodes (OLED) use reversed intersystem crossing (RISC) to harvest light from excited triplet states. This is a slow process, thus increasing the rate of RISC could potentially enhance OLED performance. Here we demonstrate selective coupling of the excited singlet state of Erythrosine B without perturbing the energy level of a nearby triplet state. The coupling reduces the triplet-singlet energy gap, leading to a four-time enhancement of the triplet decay rate, most likely due to an enhanced rate of RISC. Furthermore, we anticipate that strong coupling can be used to create energy-inverted molecular systems having a singlet ground and lowest excited state.

| S-EPMC5995866 | biostudies-literature

Resonance-Enhanced Multiphoton Ionization Studies of the Lower Electronically Excited States of Flavone.

Project description:The spectroscopic and dynamics properties of flavone─the core chromophore of a wide variety of naturally occurring ultraviolet protecting filters─have been studied under supersonic beam conditions using (1 + 1') resonance-enhanced two-photon ionization spectroscopic techniques. Excitation spectra recorded under such conditions are found to differ significantly from previously reported spectra. Pump-probe studies find that intersystem crossing is the dominant decay pathway of the excited singlet manifold, in agreement with previous solution phase studies and quantum chemical predictions for the isolated molecule. Microsolvation studies on flavone-water clusters reveal that the addition of one and two water molecules leads to considerable shifts in excitation energies but that further complexation does not result in further noticeable shifts. The relaxation pathways of the electronically excited states, on the other hand, do not appear to be influenced by interactions with the solvent molecules. Finally, photoionization spectra have enabled the accurate determination of the adiabatic ionization energy to the ground state of the molecular ion─key to the antioxidant properties of flavone─as 65,415 cm-1 (8.110 eV).

| S-EPMC9969512 | biostudies-literature

On the Low-Lying Electronically Excited States of Azobenzene Dimers: Transition Density Matrix Analysis.

Project description:Azobenzene-containing molecules may associate with each other in systems such as self-assembled monolayers or micelles. The interaction between azobenzene units leads to a formation of exciton states in these molecular assemblies. Apart from local excitations of monomers, the electronic transitions to the exciton states may involve charge transfer excitations. Here, we perform quantum chemical calculations and apply transition density matrix analysis to quantify local and charge transfer contributions to the lowest electronic transitions in azobenzene dimers of various arrangements. We find that the transitions to the lowest exciton states of the considered dimers are dominated by local excitations, but charge transfer contributions become sizable for some of the lowest ππ* electronic transitions in stacked and slip-stacked dimers at short intermolecular distances. In addition, we assess different ways to partition the transition density matrix between fragments. In particular, we find that the inclusion of the atomic orbital overlap has a pronounced effect on quantifying charge transfer contributions if a large basis set is used.

| S-EPMC8303869 | biostudies-literature

Multistate Energy Decomposition Analysis of Molecular Excited States.

Project description:A multistate energy decomposition analysis (MS-EDA) method is described to dissect the energy components in molecular complexes in excited states. In MS-EDA, the total binding energy of an excimer or an exciplex is partitioned into a ground-state term, called local interaction energy, and excited-state contributions that include exciton excitation energy, superexchange stabilization, and orbital and configuration-state delocalization. An important feature of MS-EDA is that key intermediate states associated with different energy terms can be variationally optimized, providing quantitative insights into widely used physical concepts such as exciton delocalization and superexchange charge-transfer effects in excited states. By introducing structure-weighted adiabatic excitation energy as the minimum photoexcitation energy needed to produce an excited-state complex, the binding energy of an exciplex and excimer can be defined. On the basis of the nature of intermolecular forces through MS-EDA analysis, it was found that molecular complexes in the excited states can be classified into three main categories, including (1) encounter excited-state complex, (2) charge-transfer exciplex, and (3) intimate excimer or exciplex. The illustrative examples in this Perspective highlight the interplay of local excitation polarization, exciton resonance, and superexchange effects in molecular excited states. It is hoped that MS-EDA can be a useful tool for understanding photochemical and photobiological processes.

| S-EPMC10369419 | biostudies-literature

Population shuffling between ground and high energy excited states.

Project description:Stochastic processes powered by thermal energy lead to protein motions traversing time-scales from picoseconds to seconds. Fundamental to protein functionality is the utilization of these dynamics for tasks such as catalysis, folding, and allostery. A hierarchy of motion is hypothesized to connect and synergize fast and slow dynamics toward performing these essential activities. Population shuffling predicts a "top-down" temporal hierarchy, where slow time-scale conformational interconversion leads to a shuffling of the free energy landscape for fast time-scale events. Until now, population shuffling was only applied to interconverting ground states. Here, we extend the framework of population shuffling to be applicable for a system interconverting between low energy ground and high energy excited states, such as the SH3 domain mutants G48M and A39V/N53P/V55L from the Fyn tyrosine kinase, providing another tool for accessing the structural dynamics of high energy excited states. Our results indicate that the higher energy gauche - rotameric state for the leucine ?2 dihedral angle contributes significantly to the distribution of rotameric states in both the major and minor forms of the SH3 domain. These findings are corroborated with unrestrained molecular dynamics (MD) simulations on both the major and minor states of the SH3 domain demonstrating high correlations between experimental and back-calculated leucine ?2 rotameric populations. Taken together, we demonstrate how fast time-scale rotameric side-chain population distributions can be extracted from slow time-scale conformational exchange data further extending the scope and the applicability of the population shuffling model.

| S-EPMC4622205 | biostudies-literature

Electronically excited states in poly(p-phenylenevinylene): vertical excitations and torsional potentials from high-level ab initio calculations.

Project description:Ab initio second-order algebraic diagrammatic construction (ADC(2)) calculations using the resolution of the identity (RI) method have been performed on poly-(p-phenylenevinylene) (PPV) oligomers with chain lengths up to eight phenyl rings. Vertical excitation energies for the four lowest ?-?* excitations and geometry relaxation effects for the lowest excited state (S1) are reported. Extrapolation to infinite chain length shows good agreement with analogous data derived from experiment. Analysis of the bond length alternation (BLA) based on the optimized S1 geometry provides conclusive evidence for the localization of the defect in the center of the oligomer chain. Torsional potentials have been computed for the four excited states investigated and the transition densities divided into fragment contributions have been used to identify excitonic interactions. The present investigation provides benchmark results, which can be used (i) as reference for lower level methods and (ii) give the possibility to parametrize an effective Frenkel exciton Hamiltonian for quantum dynamical simulations of ultrafast exciton transfer dynamics in PPV type systems.

| S-EPMC3598239 | biostudies-literature

Excited-State Dynamics of Crossing-Controlled Energy Transfer in Europium Complexes.

Project description:Photosensitized energy transfer (EnT) phenomena occur frequently in a variety of photophysical and photochemical processes and have traditionally been treated with the donor-acceptor distance-dependent Förster and Dexter models. However, incorrect arguments and formulae were employed by ignoring energy resonance conditions and the selection rules of the state-to-state transition in special cases, especially for the sensitive intramolecular EnT of lanthanide complexes. Herein, we proposed an innovative model of energy-degeneracy-crossing-controlled EnT, which can be experimentally confirmed by time-resolved two-dimensional photoluminescence measurements. The computationally determined energy resonance region provides the most effective channel to achieve metal-to-ligand EnT beyond the distance-dependent model and sensitively bifurcates into symmetry-allowed or -forbidden channels for some representative europium antenna complexes. The outcomes of the multidisciplinary treatment contribute to a complementary EnT model that can be tuned by introducing a phosphorescence modulator and altering the antenna-related parameters of the ligand-centered energy level of the 3ππ* state and its spin-orbit coupling for the 3ππ* → S0 * transition through mechanism-guided crystal engineering and should motivate further development of mechanistic models and applications.

| S-EPMC9088298 | biostudies-literature

Mechanisms for ultrafast nonradiative relaxation in electronically excited eumelanin constituents.

Project description:We investigate the relaxation dynamics of melanin model constituents including monomers, dimers, and tetramers, upon excitation, using state-of-the-art, time-dependent, density functional theory calculations. The results explain the ability of these molecules to transform photon energy into thermal energy in a remarkably short timescale of approximately 100 fs. We find that after electronic excitation by light absorption, ultrafast energy conversion takes place through two novel mechanisms: proton transfer on a timescale of 110 fs and state mixing upon oligomerization on a timescale of <50 fs. These results are in good agreement with available experiments and help elucidate melanin's role in photoprotection against ultraviolet radiation.

| S-EPMC2567931 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data