Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Draft Genome Sequence of Bacteroides reticulotermitis Strain JCM 10512T, Isolated from the Gut of a Termite.

ABSTRACT: Here we report the draft genome sequence of Bacteroides reticulotermitis strain JCM 10512(T), a xylanolytic and cellulolytic bacterium isolated from the gut of a wood-feeding termite. The genome information will facilitate the study of this strain for biomass degradation and adaptation to the gut environment.

SUBMITTER: Yuki M

PROVIDER: S-EPMC3924377 | biostudies-other | 2014

REPOSITORIES: biostudies-other

ACCESS DATA

Json Xml

Publications

Draft Genome Sequence of Bacteroides reticulotermitis Strain JCM 10512T, Isolated from the Gut of a Termite.

Yuki Masahiro M Oshima Kenshiro K Suda Wataru W Sakamoto Mitsuo M Iida Toshiya T Hattori Masahira M Ohkuma Moriya M

Genome announcements 20140213 1

Here we report the draft genome sequence of Bacteroides reticulotermitis strain JCM 10512(T), a xylanolytic and cellulolytic bacterium isolated from the gut of a wood-feeding termite. The genome information will facilitate the study of this strain for biomass degradation and adaptation to the gut environment. ...[more]

PMID: 24526645

Similar Datasets

Draft Genome Sequence of the Alkaliphilic and Xylanolytic Paenibacillus sp. Strain JCM 10914, Isolated from the Gut of a Soil-Feeding Termite.

Project description:Panibacillus sp. strain JCM 10914 is a xylanolytic alkaliphile isolated from the gut of a soil-feeding termite. Its draft genome sequence revealed various genes for hydrolytic enzymes and will facilitate studies on adaptation to the highly alkaline gut environment and its role in digesting soil organic matter in the gut.

| S-EPMC3900890 | biostudies-other

Draft genome sequence of Bacteroides faecis MAJ27T, a strain isolated from human feces.

Project description:Despite the ecological importance of the dominant gut bacteria Bacteroides, few genomes have been defined. The Gram-negative, strictly anaerobic intestinal bacterium Bacteroides faecis MAJ27(T) was isolated from the feces of a healthy adult. Here, the draft genome sequence of the type strain B. faecis MAJ27 (6.11 Mbp) is reported.

| S-EPMC3232885 | biostudies-literature

Draft Genome Sequence of a Metronidazole-Resistant Bacteroides fragilis Strain Isolated in Ecuador.

Project description:Here, we report the draft genome sequence of Bacteroides fragilis strain Z&Z143, a metronidazole-resistant bacterium isolated from a blood culture from an Ecuadorian patient hospitalized in a medical institution in Quito, Ecuador. We describe a new variant of the nim genes, which is associated with metronidazole resistance.

| S-EPMC6895302 | biostudies-literature

Draft Genome Sequence of Novel Metschnikowia sp. Strain JCM 33374, a Nectar Yeast Isolated from a Bumblebee.

Project description:Here, we report the draft genome sequence of Metschnikowia sp. strain JCM 33374, a nectar yeast isolated from a bumblebee (Bombus diversus). The genome of 20.1?Mb is a naturally heterozygous diploid. Phylogenetic analysis with related taxa demonstrated that the strain is very likely a novel species.

| S-EPMC6742794 | biostudies-literature

Draft Genome Sequence of Clostridium straminisolvens Strain JCM 21531T, Isolated from a Cellulose-Degrading Bacterial Community.

Project description:Here, we report the draft genome sequence of a fibrolytic bacterium, Clostridium straminisolvens JCM 21531(T), isolated from a cellulose-degrading bacterial community. The genome information of this strain will be useful for studies on the degradation enzymes and functional interactions with other members in the community.

| S-EPMC3931369 | biostudies-other

Draft Genome Sequence of Oleaginous Yeast Saitozyma sp. Strain JCM 24511, Isolated from Soil on Iriomote Island, Okinawa, Japan.

Project description:Here, we report draft genome sequence of oleaginous yeast strain Saitozyma sp. JCM 24511, which is phylogenetically closely related to Saitozyma podzolica These data will have implications not only for the study of the oleaginous activities of yeasts but also for the study of the plant-microorganism microbiome.

| S-EPMC7686417 | biostudies-literature

Draft Genome Sequence of Agarivorans sp. Strain Toyoura001, Isolated from an Abalone Gut.

Project description:Agarivorans sp. strain Toyoura001 is a bacterium isolated from the gut of a wild abalone, Haliotis discus hannai Here, we report the draft genome sequence of strain Toyoura001, which consists of 60 contigs comprising 4.67 Mb and 4,257 protein-coding genes.

| S-EPMC6509519 | biostudies-literature

Draft Genome Sequence of a Bacteroides fragilis Strain Isolated from Peritoneal Fluid of a Patient from Kazakhstan.

Project description:Here, we report the draft genome sequence of Bacteroides fragilis strain KZ02, isolated from a patient with peritonitis hospitalized in a health facility in Nur-Sultan, Kazakhstan. The genome of the strain contains 4,103 protein-coding genes, including the cepA gene, which causes resistance to beta-lactam antibiotics.

| S-EPMC7317096 | biostudies-literature

Genome Sequence of Lignin-Degrading Arthrobacter sp. Strain RT-1, Isolated from Termite Gut and Rumen Fluid.

Project description:Here, we report the genome sequence of Arthrobacter sp. strain RT-1, isolated from a cocktail of termite gut and rumen fluid. Strain RT-1 degrades a variety of lignin monomers and dimers as the growth substrates. The genome annotation predicted the genes necessary for the catabolism of lignin-derived aromatic compounds.

| S-EPMC6965588 | biostudies-literature

Complete Genome Sequence of Bifidobacterium scardovii Strain JCM 12489T, Isolated from Human Blood.

Project description:Bifidobacterium scardovii strain JCM 12489(T) was isolated from human blood and has the largest bifidobacterial genome reported to date. Here, we report the complete genome sequence of this organism. This paper is the first report demonstrating the fully sequenced and completely annotated genome of a B. scardovii strain.

| S-EPMC4392160 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data