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Cave Diplopoda of southern China with reference to millipede diversity in Southeast Asia.

ABSTRACT: The diversity of Diplopoda in caves of southern China is remarkably high, often 5-6 species per cave, consisting mostly of local endemics and presumed troglobionts. These are evidently biased to just a few lineages, mainly members of the orders Chordeumatida and Callipodida, the families Cambalopsidae (Spirostreptida) and Haplodesmidae (Polydesmida) or the genera Pacidesmus, Epanerchodus and Glenniea (all Polydesmida, Polydesmidae), Trichopeltis (Polydesmida, Cryptodesmidae), Dexmoxytes (Polydesmida, Paradoxosomatidae) and Hyleoglomeris (Glomerida, Glomeridae). All these taxa, especially the Paradoxosomatidae and Cambalopsidae (usually amounting to about 60% and 10% of the total species diversity in the Oriental fauna, respectively), are moderately to highly speciose across Southeast Asia, being largely epigean. However, the epigean Diplopoda of southern China are yet badly understudied, since much of the collecting and taxonomic exploration efforts still focus on cavernicoles. The Oriental Region is the only biogeographic realm globally that harbours all 16 orders of Diplopoda, of which 14 have already been encountered in China and/or the immediately adjacent parts of Indochina. Thus, China may actually prove to support no less than 1,000 millipede species of various origins, mainly Oriental and Palaearctic.

SUBMITTER: Golovatch SI

PROVIDER: S-EPMC4523766 | biostudies-other | 2015

REPOSITORIES: biostudies-other

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Project description:Objectives: In this study, we aimed to analyse the genetic diversity Kelch 13 (K13) propeller allele of the Plasmodium falciparum isolates mainly imported from Southeast Asia and Africa in southern China, including the provinces of Yunnan and Guangxi. Methods: At enrolment, we collected blood samples from patients with confirmed cases of malaria infection between January 2012 and December 2017, for analysis. Individual patient information was obtained via a malaria surveillance system. The malaria infections and P. falciparum K13 mutations were diagnosed by using a nested polymerase chain reaction (PCR) method. Results: The K13 mutations were identified in 283 P. falciparum isolates from 18 counties in Yunnan and 22 counties in Guangxi. Of Forty-six isolates (46/283, 16.3%) that harbored K13 mutant alleles were detected: 26.8% in Yunnan (33/123) and 8.1% in Guangxi (13/160). A total of 18 different K13 mutations were detected. Only the F446I mutation was detected in Yunnan isolates, and F446I was more frequent (20/46, 43.5%) than other alleles. Further, the temporal distribution of the F446I mutation ratio from 2012 to 2015 exhibited no significant difference in Yunnan Province (2012, 2/13, 15.4%; 2013, 7/40, 17.5%; 2014, 7/33, 21.2%; 2015, 4/37, 10.8%, p = 0.121). A578S allele was the main K13 mutation (5/283, 1.8%) from Africa. The K13 mutants were present in 33.3% of indigenous isolates, 27.4% of isolates from Southeast Asia, and 7.9% of isolates from Africa. The analysis of 10 neutral microsatellite loci of 60 isolates showed that at the TAA109 locus, the expected heterozygosity of F446I (H e = 0.112 ± 0.007) was much lower than that of wild type and other mutation types in Myanmar isolates. With respect to geographic distribution, TAA109 also exhibited a significant difference between isolates from Southeast Asia (H e = 0.139 ± 0.012) and those from Africa (H e = 0.603 ± 0.044). Conclusions: The present findings on the geographic diversity of K13 mutant alleles in P. falciparum may provide a basis for routine molecular surveillance and risk assessment, to monitor artemisinin resistance (ART) in China. Our results will be helpful for enriching the artemisinin resistance database in China during the elimination and post-elimination phases.

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Cave Diplopoda of southern China with reference to millipede diversity in Southeast Asia.

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