Ontology highlight
ABSTRACT:
SUBMITTER: Liu Y
PROVIDER: S-EPMC4629039 | biostudies-other | 2015
REPOSITORIES: biostudies-other
Liu Yu Y Hong Yang Y Lin Chun-Yuan CY Hung Che-Lun CL
International journal of genomics 20151019
The Smith-Waterman (SW) algorithm has been widely utilized for searching biological sequence databases in bioinformatics. Recently, several works have adopted the graphic card with Graphic Processing Units (GPUs) and their associated CUDA model to enhance the performance of SW computations. However, these works mainly focused on the protein database search by using the intertask parallelization technique, and only using the GPU capability to do the SW computations one by one. Hence, in this pape ...[more]