Dataset Information

Classification of images based on small local features: a case applied to microaneurysms in fundus retina images.

ABSTRACT: Convolutional neural networks (CNNs), the state of the art in image classification, have proven to be as effective as an ophthalmologist, when detecting referable diabetic retinopathy. Having a size of [Formula: see text] of the total image, microaneurysms are early lesions in diabetic retinopathy that are difficult to classify. A model that includes two CNNs with different input image sizes, [Formula: see text] and [Formula: see text], was developed. These models were trained using the Kaggle and Messidor datasets and tested independently against the Kaggle dataset, showing a sensitivity [Formula: see text], a specificity [Formula: see text], and an area under the receiver operating characteristics curve [Formula: see text]. Furthermore, by combining these trained models, there was a reduction of false positives for complete images by about 50% and a sensitivity of 96% when tested against the DiaRetDB1 dataset. In addition, a powerful image preprocessing procedure was implemented, improving not only images for annotations, but also decreasing the number of epochs during training. Finally, a feedback method was developed increasing the accuracy of the CNN [Formula: see text] input model.

SUBMITTER: Ordonez PF

PROVIDER: S-EPMC5696573 | biostudies-other | 2017 Oct

REPOSITORIES: biostudies-other

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Classification of images based on small local features: a case applied to microaneurysms in fundus retina images.

Ordóñez Pablo F PF Cepeda Carlos M CM Garrido Jose J Chakravarty Sumit S

Journal of medical imaging (Bellingham, Wash.) 20171001 4

Convolutional neural networks (CNNs), the state of the art in image classification, have proven to be as effective as an ophthalmologist, when detecting referable diabetic retinopathy. Having a size of [Formula: see text] of the total image, microaneurysms are early lesions in diabetic retinopathy that are difficult to classify. A model that includes two CNNs with different input image sizes, [Formula: see text] and [Formula: see text], was developed. These models were trained using the Kaggle a ...[more]

PMID: 29201938

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Project description:Background: Pathologic myopia (PM) associated with myopic maculopathy (MM) and "Plus" lesions is a major cause of irreversible visual impairment worldwide. Therefore, we aimed to develop a series of deep learning algorithms and artificial intelligence (AI)-models for automatic PM identification, MM classification, and "Plus" lesion detection based on retinal fundus images. Materials and Methods: Consecutive 37,659 retinal fundus images from 32,419 patients were collected. After excluding 5,649 ungradable images, a total dataset of 32,010 color retinal fundus images was manually graded for training and cross-validation according to the META-PM classification. We also retrospectively recruited 1,000 images from 732 patients from the three other hospitals in Zhejiang Province, serving as the external validation dataset. The area under the receiver operating characteristic curve (AUC), sensitivity, specificity, accuracy, and quadratic-weighted kappa score were calculated to evaluate the classification algorithms. The precision, recall, and F1-score were calculated to evaluate the object detection algorithms. The performance of all the algorithms was compared with the experts' performance. To better understand the algorithms and clarify the direction of optimization, misclassification and visualization heatmap analyses were performed. Results: In five-fold cross-validation, algorithm I achieved robust performance, with accuracy = 97.36% (95% CI: 0.9697, 0.9775), AUC = 0.995 (95% CI: 0.9933, 0.9967), sensitivity = 93.92% (95% CI: 0.9333, 0.9451), and specificity = 98.19% (95% CI: 0.9787, 0.9852). The macro-AUC, accuracy, and quadratic-weighted kappa were 0.979, 96.74% (95% CI: 0.963, 0.9718), and 0.988 (95% CI: 0.986, 0.990) for algorithm II. Algorithm III achieved an accuracy of 0.9703 to 0.9941 for classifying the "Plus" lesions and an F1-score of 0.6855 to 0.8890 for detecting and localizing lesions. The performance metrics in external validation dataset were comparable to those of the experts and were slightly inferior to those of cross-validation. Conclusion: Our algorithms and AI-models were confirmed to achieve robust performance in real-world conditions. The application of our algorithms and AI-models has promise for facilitating clinical diagnosis and healthcare screening for PM on a large scale.

Dataset Information

Classification of images based on small local features: a case applied to microaneurysms in fundus retina images.

Publications

Classification of images based on small local features: a case applied to microaneurysms in fundus retina images.

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