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MAST Kinase and Notch Gene Families in Breast Cancer

ABSTRACT:

Paired-end transcriptome sequencing was performed on a panel of breast cancer cell lines and tissues and a set of benign cell line and tissue controls. Analyses of the paired end sequences were performed and chimeric transcripts derived from gene rearrangement events were identified. Sequencing was performed on Illumina GAII and HiSeq 2000 platforms with read lengths from 40 to 100 bases.

PROVIDER: phs000513 | dbGaP |

SECONDARY ACCESSION(S): PRJNA170337PRJNA170338

REPOSITORIES: dbGaP

ACCESS DATA

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Dataset's files

Source:

			Action	DRS
	GapExchange_phs000513.v1.p1.xml	Xml
	dbGaPEx2.1.5.xsd	Other
	Study_Report.phs000513.MASTKinaseNotchGene_BC.v1.p1.MULTI.pdf	Pdf
	manifest_phs000513.MASTKinaseNotchGene_BC.v1.p1.c1.CRGM.pdf	Pdf
	datadict_v2.xsl	Other

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Rearrangements of the MAST Kinase and Notch Gene Families in Breast Cancer

Project description:<p>Paired-end transcriptome sequencing was performed on a panel of breast cancer cell lines and tissues and a set of benign cell line and tissue controls. Analyses of the paired end sequences were performed and chimeric transcripts derived from gene rearrangement events were identified. Sequencing was performed on Illumina GAII and HiSeq 2000 platforms with read lengths from 40 to 100 bases.</p>

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