Project description:250k Sty, 250k Nsp, 250k Hind and 250k Xba Affymetrix SNP arrays for 50 leukemia remission samples used as controls for copy number analysis for GSE9109 and GSE9112. Keywords: Acute leukemia, BCR-ABL1, chronic myeloid leukemia, copy number analysis, loss-of-heterozygosity, genomics *** Due to privacy concerns, the primary SNP array data is no longer available with unrestricted access. Individuals wishing to obtain this data for research purposes may request access using the Web links below. ***

2009-09-02 | GSE9111 | GEO

RNA-seq access dataset for epigenomics landscape of colorectal cancer

Project description:RNA-seq access dataset for epigenomics landscape of colorectal cancer

| PRJNA562898 | ENA

Dual ST dataset access committee

Project description:Data Access Committee EGAC00001002635

| EGAC00001002635 | EGA

Data access committee DMDMex dataset

Project description:Data Access Committee EGAC00001001871

| EGAC00001001871 | EGA

Genome-wide DNA access sites in ventilated preterm lamb lungs [ATAC-seq]

Project description:Purpose: ATAC-seq was performed on preterm lambs that were ventilated by invasive mechanical ventilation or noninvasive respiratory support utilizing a mask and compared to gestation-age-matched preterm lambs that were not ventilated and naturally delivered term lambs. Methods: Lung chromatin access profiles were generated for: 1) Unventilated preterm lamb, 2) preterm lambs delivered at gd131 and intubated and mechanically ventilated for 3 days, 3) preterm lambs delivered at gd131 and not intubated and resuscitated by placing a face mask over the nose and mouth and controlling O2 delivery via a computer-controlled electronic blower device, 4) unventilated naturally delivered full-term lambs. Results: Using an optimized data analysis workflow, we mapped between 76 and 96 million sequence reads per sample to the sheep genome Conclusions: Our study represents the first detailed analysis of ventilated preterm lung chromatin access, with biologic replicates, generated by ATAC-seq

2021-06-30 | GSE163807 | GEO

Data access committee for the HOMOCULTURGEN dataset

Project description:Data Access Committee EGAC00001003485

| EGAC00001003485 | EGA