Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

EGAS00001000704-sc-20170511 - samples

ABSTRACT: The samples will be sequenced for a targeted panel of cancer relevant genes (n ~ 370) and analysed for somatic mutations. This dataset contains all the data available for this study on 2017-05-11.

PROVIDER: EGAD00001003330 | EGA |

REPOSITORIES: EGA

ACCESS DATA

Json Xml

Similar Datasets

Metastatic breast cancer targeted gene screen

Project description:The samples will be sequenced for a targeted panel of cancer relevant genes (n ~ 370) and analysed for somatic mutations.

| EGAS00001000704 | EGA

EGAS00001001218-sc-20170511 - samples

Project description:PCR and MiSeq validation for early embryonic substitution candidates from 400 Breast cancer patients This dataset contains all the data available for this study on 2017-05-11.

| EGAD00001003332 | EGA

EGAS00001001171-sc-20170511 - samples

Project description:Targeted exome sequencing of patient derived xenografts from primary colorectal tumours and liver metastases. This dataset contains all the data available for this study on 2017-05-11.

| EGAD00001003334 | EGA

EGAS00001000704-sc-20140924 - samples

Project description:The samples will be sequenced for a targeted panel of cancer relevant genes (n ~ 370) and analysed for somatic mutations. This dataset contains all the data available for this study on 2014-09-24

| EGAD00001001018 | EGA

EGAS00001001114-sc-20170511 - samples

Project description:Whole-exome sequencing of a cohort of families (probands and affected/unaffected relatives) suffering from one of two rare thyroid disorders: congenital hypothyroidism (CH) and resistance to thyroid hormone (RTH). This dataset contains all the data available for this study on 2017-05-11.

| EGAD00001003331 | EGA

EGAS00001000462-sc-20170511 - samples

Project description:The offspring of first cousin marriages have ~6% of their genome autozygous, i.e. homozygous identical by descent, or even more if there was further consanguinity in their ancestry. In the UK there are large populations with very high first cousin marriage rates of 20-50%. Sequencing the exomes of a sample of these individuals has the potential both to support genetic health programmes in these populations, and to provide genetic research information about rare loss of function mutations. This pilot study based on existing cohort samples from the Born In Bradford study will identify homozygous individuals for almost all variants down to an allele frequency around 1%, plus individuals carrying hundreds of new homozygous rare loss-of-function variants, and will support development of community relations and ethics for a wider study currently being designed. The data deposited in the EGA consist of low coverage whole exome sequencing on these samples. This dataset contains all the data available for this study on 2017-05-11.

| EGAD00001003329 | EGA

EGAS00001000958-sc-20170504 - samples

Project description:This dataset contains all the data available for this study on 2017-05-04.

| EGAD00001003321 | EGA

Trascriptome profiling of murine Embryonic Stem cells under different culture conditions

Project description:Mouse Embryonic Stem (ES) cells have been cultured under chemically defined conditions in the absence of feeder cells on Gelatin coated dishes, for 5 passages under 4 different combinations of LIF and GSK3 or MEK inhibitors. Their trascriptome have been analysed by RNA sequencing. The ES cell line used, RexGFPd2, contains a destablised GFP protein in the Zfp42/Rex1 locus and was derived under 2i conditions, as described in Kalkan et al. 2017.

2018-11-21 | GSE111694 | GEO

Project description:Somatic haploidization-11

| PRJNA793741 | ENA

Investigating the follow-up care needs of people with colorectal cancer and piloting a telephone intervention

Project description:Study hypothesis: What are the follow-up care needs of people with colorectal cancer? Can a telephone intervention, currently being evaluated for people with breast cancer, have wider applicability and be relevant for people with colorectal cancer? Primary outcome(s): 1. Patients views and preferences on follow-up care after treatment for colorectal cancer. Added 05/11/08: 2. Satisfaction with information received 3. Satisfaction with follow-up service provision 4. Psychological morbidity

| 2424750 | ecrin-mdr-crc

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data