Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

EGAS00001003479-sc-2021-10-06T08:50:52Z - samples

ABSTRACT: We isolated naive and memory CD4+ T cells from 119 healthy individuals and stimulated the cells using anti-CD3/anti-CD28 coated beads. We profiled gene expression using single cell RNA-seq (10X-Genomics 3Ã¢Â€Â™ v2 kit) at resting state and three time points of activation (16h, 40h and 5 days post stimulation) and mapped expression quantitative trait loci.

PROVIDER: EGAD00001008197 | EGA |

REPOSITORIES: EGA

ACCESS DATA

Json Xml

Similar Datasets

The effect of IFNα on human CD8 T cells_with other concomitant signals

Project description:IFN alpha mediated gene expression pattern. The effect of IFN alpha on human CD8 T cells responding to antigen (signal 1) and costimulatory signals (signal 2) provided by beads coated with anti-CD3 and anti-CD28 mAbs. This analysis examined the effects of IFN alpha on human CD8 T cells responding to antigen (signal 1) and costimulatory signals (signal 2) provided by beads coated with anti-CD3 and anti-CD28 mAbs. Magnetically sorted untouched CD8+CD45R0- T cells from three different donors were unstimulated or stimulated with IFNa2b or with anti-CD3/CD28 Beads alone or along with IFNa2b or IFNa5 for 48 hours. Individual mRNA samples were analyzed using HG-U133A 2.0 array gene chips. Keywords: Gene expression analysis after different stimulation

2010-07-23 | GSE17301 | GEO

Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCSR440SZD)

Project description:H3K4me1 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-11-04 | GSE187663 | GEO

Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCSR594FUA)

Project description:H3K9me3 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-11-04 | GSE187593 | GEO

Control Mint-ChIP-seq from CD4-positive naive resting alpha-beta T cell (ENCSR490HRA)

Project description:Control Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-11-04 | GSE187458 | GEO

Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCSR663SHP)

Project description:H3K36me3 Mint-ChIP-seq on CD4-positive naive resting alpha-beta T cell male adult (35 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2022-07-22 | GSE209435 | GEO

The effect of IFNα on human CD8 T cells_with other concomitant signals

2010-07-23 | E-GEOD-17301 | biostudies-arrayexpress

Transcriptome data from human Th17, classic Th1 and non-classic Th1 cell clones

Project description:Human T cell clones were derived according to standard protocols, once assessed for their functional profile were studied for gene expression. The purpose of this study is to analyze human classic Th1, non-classic Th1 and Th17 clones with and without stimulation with anti-CD2+anti-CD3+anti-CD28 coated beads to measure differences in gene expression.

2018-12-01 | GSE110230 | GEO

Control Mint-ChIP-seq from activated CD8-positive, alpha-beta T cell (ENCSR741YCX)

Project description:Control Mint-ChIP-seq of activated CD8-positive, alpha-beta T cell male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177604 | GEO

Mint-ChIP-seq from activated CD4 positive, naive alpha-beta T cell (ENCSR845GYI)

Project description:H3K27ac Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (43 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177926 | GEO

Mint-ChIP-seq from activated CD4-positive, alpha-beta T cell (ENCSR333JIO)

Project description:H3K27me3 Mint-ChIP-seq of activated CD4-positive, alpha-beta T cell male adult (20 years) treated with anti-CD3 and anti-CD28 coated beads For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177169 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data